VIMSS203226 has 574 amino acids
Query: DUF3373 [M=409]
Accession: PF11853.12
Description: Protein of unknown function (DUF3373)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7e-151 488.9 6.4 7e-151 488.9 6.4 1.7 2 VIMSS203226
Domain annotation for each sequence (and alignments):
>> VIMSS203226
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.7 0.2 0.031 0.031 186 262 .. 14 105 .. 4 138 .. 0.58
2 ! 488.9 6.4 7e-151 7e-151 2 409 .] 151 574 .] 150 574 .] 0.98
Alignments for each domain:
== domain 1 score: -0.7 bits; conditional E-value: 0.031
DUF3373 186 kvelqlarafnifdypkgaaavsktlag..............nfkafgsvaessevGdid..lagllflaevkgegiglddlnaFvslalskt 262
+++ q++ a+n ++ +++++a k+ + +++ +s + Gd+ +++l + + v + +i+ ++n F + a+s
VIMSS203226 14 FMSGQAFAAANNTQADTQKMAELKQQLTditeqldelnsrvdKTERHTSLDRLEITGDFRtkAHSLHYRDVVWNPAIN-VNFNDFGAKAMSGV 105
555566666665555555555444444456666666666553333344444455668875114566677777777777.78999999999864 PP
== domain 2 score: 488.9 bits; conditional E-value: 7e-151
DUF3373 2 skndtlytnrlrLnlkakatenvsfkgrLamyKafGeqddeavsnsnsksavlDgtlgevpsddslrvdrayftykniadvpiwfSvGRRPstdGaps 99
+nd +yt+rlrLnlkak+++nvsf+grL+myK++G++++++v++s++++ ++Dgt++ ++s d+lrv+rayf++kni+++++++S+GRRPst+G+ps
VIMSS203226 151 IDNDIFYTTRLRLNLKAKVWDNVSFAGRLSMYKNWGDSTGVQVFDSWRSF-TMDGTSSGNTSGDWLRVERAYFDWKNINGSEFYLSIGRRPSTYGPPS 247
58********************************************9866.*********************************************** PP
DUF3373 100 nlrenkeerggsPlsllidveFDGatlgyalekvtelpgayvklCyGrGfenaagraegleakkenslkdvdllGliivpidddqykvelqlarafni 197
++ren e rgg+P+++l++++FDGatlgy+l ++t+++g++v++CyG+Gfe+++g+ e++ + +kd++l G++i++i+d++ +++++l+ a+++
VIMSS203226 248 HYREN-ELRGGTPSGHLVNFNFDGATLGYNLGELTGIEGQIVRFCYGQGFESQWGNGEMF---GDIVTKDTHLGGFNIDAINDGTNFLQFTLFGAKDV 341
*****.**************************************************9976...7889******************************* PP
DUF3373 198 fdypkgaaavsktlag..............nfkafgsvaessevGdidlagllflaevkgegiglddlnaFvslalsktepngn.............. 267
+d++kg++a++++lag nf+++++v++s +Gd++l g++f+ e + d+++F+sl+++++epngn
VIMSS203226 342 NDGFKGTMAFPTQLAGifaptmyqdmqkfdNFNFVTRVQPSGVIGDMYLGGIGFAREEAN------DIKWFASLGWTRAEPNGNagmfggmlsdavfe 433
******************************9**************************744......9******************************* PP
DUF3373 268 ..leaaltegllkdealgstesktGysvyvGvrydleatkgklGlEYNhGSkyWisftaaeDdligsKlatRGdvyevYliqelklkealslklgyqy 363
l++++te+++ +++ ++t++k+Gy++yvG++++ a+ gk+GlEYN+GS+yW++ft+a+Dd igsKlatRG+v e+Y+i +++ +++++kl+ y
VIMSS203226 434 aeLNSTGTEIIMVPKTSDDTDTKDGYGIYVGIQIP--APYGKFGLEYNYGSEYWTPFTQAQDDPIGSKLATRGHVGEAYYIFDIN--PKMFIKLAGLY 527
**9999*****************************..799*********************************************..9********** PP
DUF3373 364 ydyeYtgSnswvgaPvkiedvtalea.qmlavvdkaqdiyltlevrf 409
ydyeYtgS+++vgaP+ki+dv a++a +ml+vvdka d++++l+++f
VIMSS203226 528 YDYEYTGSGTPVGAPQKIDDVLAGSAySMLPVVDKAFDVNASLTINF 574
*************************99****************9988 PP
Or compare VIMSS203226 to CDD or PaperBLAST