VIMSS2044050 has 380 amino acids
Query: DUF4043 [M=376]
Accession: PF13252.11
Description: Protein of unknown function (DUF4043)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-14 38.1 0.1 1.7e-11 29.7 0.0 2.2 2 VIMSS2044050
Domain annotation for each sequence (and alignments):
>> VIMSS2044050
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 6.5 0.0 0.00018 0.00018 57 135 .. 64 142 .. 60 190 .. 0.82
2 ! 29.7 0.0 1.7e-11 1.7e-11 204 368 .. 180 373 .. 166 378 .. 0.81
Alignments for each domain:
== domain 1 score: 6.5 bits; conditional E-value: 0.00018
DUF4043 57 Lvnklagapitgnevaegrgealslssdelrinelrkavdaggtmdqqrspvdlralaraalkdyldkledqealvkma 135
+ ++l+g ++ gn+ e + l++ s+++ + ++ + +d+ ++ ++l+ +++ +d+ +++ +
VIMSS2044050 64 IKAQLSGSGVSGNTDFEANYDHLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLT 142
5689*********************************999998888899999**************9888777766654 PP
== domain 2 score: 29.7 bits; conditional E-value: 1.7e-11
DUF4043 204 lrpvklegd...kaaqddelyVlllhPaqysdlradgklrqlqknAiaratvdknPlFkgeaglyngvlliki...prairfvnadsgkiaaatfs. 293
++pv+ + ++ ++ +y ++l +q ++l+ad+++++lqk a a dk l+ g +g+ + ++++ + ++++ +s+ + +
VIMSS2044050 180 IKPVRATTQsvgSVMVQNSSYLIFLDSYQANQLKADSEFKELQK-LYAFAGEDKAMLYSGLLGVIDNCPVVDAgvwNKLNVGMPNSSISGSEF--Kr 273
5555544331114455788999*********************9.5666679************99999998733357778888777755443..24 PP
DUF4043 294 ............................aasyavdrslllGaQAlakafgkkkngaipfiwseklldhgsrlevlaetidGlaktrfnvddGggak. 361
+ + + l+Ga A++ a +k+ ++f e +d g++ v++ + G++k r++ +dG +
VIMSS2044050 274 yinkanvnnivtpeelkekikiakteklSENKEISIGCLIGASAVLLAGSKE----TRFYIDET-VDAGRKSLVGVDCLLGVSKARYQSVDGVSTPy 365
577888999*******************55556666************9999....88888877.9************************9987755 PP
DUF4043 362 .ptdfgvi 368
+df vi
VIMSS2044050 366 dNQDFAVI 373
57787776 PP
Or compare VIMSS2044050 to CDD or PaperBLAST