PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS2092426 to PF04430 (DUF498)

VIMSS2092426 has 123 amino acids

Query:       DUF498  [M=109]
Accession:   PF04430.18
Description: Protein of unknown function (DUF498/DUF598)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.2e-27   81.5   0.0    2.5e-27   81.3   0.0    1.0  1  VIMSS2092426  


Domain annotation for each sequence (and alignments):
>> VIMSS2092426  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.3   0.0   2.5e-27   2.5e-27       2     109 .]      16     123 .]      15     123 .] 0.93

  Alignments for each domain:
  == domain 1  score: 81.3 bits;  conditional E-value: 2.5e-27
        DUF498   2 dgygeggfrvngkkyegsllvlpgevfawev.ak.aedlteeslallellepkpevlilGtGarlrflppelrealkergigvevmdtraAcrtyNv 96 
                   ++y +g+f +n  +y+++l++++ +v++ ++  +  + +++++l+l+  l ++pe++++GtG++++ +p e+++++ ++g  v++m ++ Ac+tyN+
  VIMSS2092426  16 KEYVKGRFILNIGEYNHPLILSATQVLEYQDkIDdIQSIKKSHLDLI--LATNPEIILIGTGEKQLLPPLEIINQIAKAGKSVDFMASDTACKTYNL 110
                   68999************************54445599999*******..7899******************************************** PP

        DUF498  97 lasegrrvaaaLi 109
                   l++e+r+v +++i
  VIMSS2092426 111 LVNENRNVSCIII 123
                   ********99886 PP



Or compare VIMSS2092426 to CDD or PaperBLAST