PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS2093351 to PF10728 (DUF2520)

VIMSS2093351 has 238 amino acids

Query:       DUF2520  [M=125]
Accession:   PF10728.13
Description: Domain of unknown function (DUF2520)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.8e-19   55.4   0.0    4.5e-19   54.7   0.0    1.3  1  VIMSS2093351  


Domain annotation for each sequence (and alignments):
>> VIMSS2093351  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   54.7   0.0   4.5e-19   4.5e-19      16     122 ..     125     229 ..     118     232 .. 0.90

  Alignments for each domain:
  == domain 1  score: 54.7 bits;  conditional E-value: 4.5e-19
       DUF2520  16 eelaeslggkvveidseqrklyHaAavfasNflvtllal.aeelleeagleeafeallpLiretlenilelgpkealTGPvaRgDaetvekhleal. 110
                   +el+ +l +  ++i+++q+++yHa +v+a+N+ + +++   +e+ ++ g++  +++l++ +++t +ni++++   al+GP+aRgD  t++k l+al 
  VIMSS2093351 125 SELLPKLPNANFCINKSQKAYYHAMCVLANNMSTLIWQKfYTEMQNRFGIN--QDYLTSFLETTFKNIKHNHH--ALSGPIARGDNLTLQKDLDALi 217
                   6788899999**********************9998875167788889***..****************9997..*******************999 PP

       DUF2520 111 dpelkelYrals 122
                   d++  +++ra+ 
  VIMSS2093351 218 DDDFYDVFRAIV 229
                   999999999876 PP



Or compare VIMSS2093351 to CDD or PaperBLAST