VIMSS2123437 has 611 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-267 874.3 6.1 1.8e-267 874.1 6.1 1.0 1 VIMSS2123437
Domain annotation for each sequence (and alignments):
>> VIMSS2123437
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 874.1 6.1 1.8e-267 1.8e-267 2 542 .. 18 607 .. 17 608 .. 0.99
Alignments for each domain:
== domain 1 score: 874.1 bits; conditional E-value: 1.8e-267
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
aral++atG+k++d++kPiiavvns+t++vPghvhl+d++klv+e+ieaaGgvakefntiav+DGiamgh+Gm+ysLpsr++iaDsve++v+ah++D
VIMSS2123437 18 ARALWRATGMKENDFGKPIIAVVNSFTQFVPGHVHLRDMGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVNAHCAD 114
79*********************************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
a+v+is+CDki+PGmlmaa+rlniPa++vsGGpmeagktkls++++++d+++a+ + a++ + ++++++ie+sacPt+gsCsG+ftansm+clteal
VIMSS2123437 115 AMVCISNCDKITPGMLMAAMRLNIPAVFVSGGPMEAGKTKLSDQLIKLDLVDAMMKSADKTVCDDDVDAIEKSACPTCGSCSGMFTANSMNCLTEAL 211
************************************************************************************************* PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkv 285
GlslPg++++lat+a++kel+ ++g++ivel+k++++ Pr+i+tk+afena++ld+a+GGstntvLhlla+a+ea+v++++ d+drlsrkv
VIMSS2123437 212 GLSLPGNGSMLATHADRKELFLTAGRQIVELCKRYYEqddasvlPRSIATKAAFENAMSLDIAMGGSTNTVLHLLAAAQEAEVDFTMADIDRLSRKV 308
************************************************************************************************* PP
TIGR00110 286 PllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vd 346
P+l+k++P+++k+ +ed+hraGG++a+l+el++++llh+d+ tv+G+t++e+++k++++ +
VIMSS2123437 309 PCLSKVAPNTNKYhMEDVHRAGGIMAILGELERADLLHSDTRTVLGMTIGEQIAKYDITLtkdeavhkffragpagirttkafsqdcrwdtvdddRQ 405
************99********************************************999******************************665444 PP
TIGR00110 347 qdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvgl 443
+ +irs++ +++++ggla+L+Gn+a +G++vk+agv+e+ilkf+G a vfes+eea+e+ilggkv++G+vv+iryeGPkGgPGm+emL+Pt++l+++
VIMSS2123437 406 NGCIRSKEFAYSQDGGLAMLTGNIALDGCIVKTAGVDESILKFTGDAIVFESQEEAVEGILGGKVRAGHVVIIRYEGPKGGPGMQEMLYPTTYLKSI 502
44*********************************************************************************************** PP
TIGR00110 444 GLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea......revkgaLakyaklvss 534
GLgk++aL+tDGrfsGgt+GlsiGh sPeaa+gG+i+lv+dGDki+iDi+nr ++l vs+eela rra++++k++ rev+ aL+ ++++++s
VIMSS2123437 503 GLGKECALLTDGRFSGGTSGLSIGHCSPEAASGGTIGLVRDGDKIAIDIPNRSIQLLVSDEELAVRRAEQDTKGWkpanrqREVSMALKMFGHFATS 599
**************************************************************************9999*999*************** PP
TIGR00110 535 adkGavld 542
adkGav+d
VIMSS2123437 600 ADKGAVRD 607
******98 PP
Or compare VIMSS2123437 to CDD or PaperBLAST