PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS2159102 to PF06006 (DUF905)

VIMSS2159102 has 76 amino acids

Query:       DUF905  [M=70]
Accession:   PF06006.16
Description: Bacterial protein of unknown function (DUF905)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.2e-48  146.8   0.6    8.1e-48  146.6   0.6    1.0  1  VIMSS2159102  


Domain annotation for each sequence (and alignments):
>> VIMSS2159102  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  146.6   0.6   8.1e-48   8.1e-48       2      70 .]       7      74 ..       6      74 .. 0.98

  Alignments for each domain:
  == domain 1  score: 146.6 bits;  conditional E-value: 8.1e-48
        DUF905  2 sLpdgtftreqaeavaaqyqnvaieDDqGthlrLvvrkadGemvWraWnfepgaeeglnryiesyGirk 70
                  +Lpd+tftreqae+vaaqy+nvaieDDqG+h+rLvvr+ +GemvWr+Wnfepg++++lnryi++yGirk
  VIMSS2159102  7 VLPDDTFTREQAEVVAAQYTNVAIEDDQGAHFRLVVRQ-NGEMVWRTWNFEPGGTYWLNRYIADYGIRK 74
                  79************************************.*****************************8 PP



Or compare VIMSS2159102 to CDD or PaperBLAST