VIMSS2168587 has 164 amino acids
Query: DUF308 [M=73]
Accession: PF03729.18
Description: Short repeat of unknown function (DUF308)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-27 82.3 38.8 5.7e-17 48.1 12.8 3.0 3 VIMSS2168587
Domain annotation for each sequence (and alignments):
>> VIMSS2168587
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 48.1 12.8 5.7e-17 5.7e-17 1 73 [] 11 78 .. 11 78 .. 0.91
2 ! 31.1 4.9 1.1e-11 1.1e-11 2 50 .. 65 113 .. 64 121 .. 0.91
3 ! 26.5 11.8 3.1e-10 3.1e-10 2 45 .. 120 163 .. 119 164 .] 0.95
Alignments for each domain:
== domain 1 score: 48.1 bits; conditional E-value: 5.7e-17
DUF308 1 llGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilsiiaGllllf 73
l+Gil++i+Gil++i P+ +ll+++i+ G+l++ sGi+ ++ af +++++g l+++ Gi+s+++Gl+l+f
VIMSS2168587 11 LEGILMAIVGILFFIKPMDSLLYFTIVAGILIIGSGIFTIIKAF--KSSRKG---LYIFTGIISVLFGLMLCF 78
68******************************************..543443...778************986 PP
== domain 2 score: 31.1 bits; conditional E-value: 1.1e-11
DUF308 2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkke 50
+Gi+++++G+++ + P+ ++ +lvi+ G ++lv Gi+ lv+ f+ ++++
VIMSS2168587 65 TGIISVLFGLMLCFVPLESIDVLVIFYGSWALVNGIFLLVGEFTYKSFG 113
7******************************************888764 PP
== domain 3 score: 26.5 bits; conditional E-value: 3.1e-10
DUF308 2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafa 45
+illiilG+l+l+ P +l+a+ ++iGv++++ ++++++ +f+
VIMSS2168587 120 YSILLIILGLLILFEPISFLIATPFIIGVYFIIIAVFEIYLGFK 163
58**************************************9995 PP
Or compare VIMSS2168587 to CDD or PaperBLAST