VIMSS217202 has 289 amino acids
Query: DUF72 [M=217]
Accession: PF01904.24
Description: Protein of unknown function DUF72
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-56 178.4 0.5 1.2e-56 178.2 0.5 1.0 1 VIMSS217202
Domain annotation for each sequence (and alignments):
>> VIMSS217202
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 178.2 0.5 1.2e-56 1.2e-56 1 216 [. 25 262 .. 25 263 .. 0.94
Alignments for each domain:
== domain 1 score: 178.2 bits; conditional E-value: 1.2e-56
B.TT..CCCHHHHHCCT-SEEEE-HHCCSSS-HHHHHHHHCTS-TT-EEEEE--CCCCCS....-CHHHHHHHHHHCHHHCT-EEEEEEE--TT--S. CS
DUF72 1 YpeglkkkerLeyYarhfntVElnstFYrlpspetvakwaeqtpegFrFavKaprsithek..keaeealerflealepLgdklgpllfQlppsfkfd 96
Yp++ +++++L +Y++ fn+VE n+tFY+ p p t+a+wa+ +pe+FrF+ K+pr ++he +++ e++ +f + ++pLg ++ p+++Qlp++f +
VIMSS217202 25 YPADANSNQMLGFYSQVFNAVEGNTTFYARPAPGTIARWAQLMPEHFRFTAKFPRDVSHEGdlRDQLEPAFDFTRLMAPLGRRVSPYWLQLPAQF--G 120
9**********************************************************96555799****************************..7 PP
H.HHHHHHHHTTTS-S.EEEE--BGGGHS.....H.HHHHHHHTT-E.EEEEE...................SSC--------SSTEEEEEE--STHH CS
DUF72 97 k.nlerLeaflaelplrlavEfRhesWft.....e.vlellrehgva.lvvad...................kkgklpledvttadfayvRlhgrere 167
+ +l +L +fl+++ + +avE+R++++f+ + +++ll+e+gv+ +++ d kk+k+p+++++ ++++ vR++g++
VIMSS217202 121 PaRLGELCHFLDQIAVPVAVEVRNQAFFAkgeeeRlLNRLLHERGVErICL-DpralfsctsrdpavlhaqsKKPKVPPRPAAFSQHPQVRFIGHP-- 215
65799999****88877***********999998799**********7777.********************99********************74.. PP
TTB----HHHHHHHHHHHHHHHTCSSEEEEEE-SBCCCHHHHHHHHHHH CS
DUF72 168 ryayrYseeelaewaeriralaaegkevyvffnndaegaapenarrLae 216
+ + ++++l +w+e+++a+ +eg++ y+f+++ ++ a++ a+r+++
VIMSS217202 216 --ELEANHTFLSPWVEKVAAWIEEGRNPYIFLHTSDNRLAAALAQRFHQ 262
..4555789**************************************98 PP
Or compare VIMSS217202 to CDD or PaperBLAST