VIMSS218060 has 1235 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-126 406.2 0.0 5.7e-126 405.6 0.0 1.3 1 VIMSS218060
Domain annotation for each sequence (and alignments):
>> VIMSS218060
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 405.6 0.0 5.7e-126 5.7e-126 1 273 [] 941 1217 .. 941 1217 .. 0.96
Alignments for each domain:
== domain 1 score: 405.6 bits; conditional E-value: 5.7e-126
Met_synt_B12 1 dleelveyidWtpffqawelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansv.gddievyadesrseelatlhtLr 94
dl++l+eyidWtpff +w+l+gk+p+il+de+vge+a++l+kdA++mL+k+i+ekl++a+av+g++pan+v +ddievy ++ + latlh+Lr
VIMSS218060 941 DLRTLAEYIDWTPFFISWDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVdDDDIEVYGEDG--QALATLHHLR 1033
6899******************************************************************94588***96555..679******* PP
Met_synt_B12 95 qqaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyakdeklsnee 189
qq+ k++g+pn +laDfvapk+sgv+Dy+G+f++tag+g+ee+ak+++++ DdYs+i+vkalaDrLaeA+ae+lhe+vrke+Wgya+de+l+ne+
VIMSS218060 1034 QQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAYQDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEA 1128
*********************************************************************************************** PP
Met_synt_B12 190 likekYqGiRpApGYpacpdhsekktlfelldaee.....kigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedyakrkg 273
like+Y+GiRpApGYpacpdh+ek+tlf+lld ++ g+ Lte++am Paa+vsG+yfahp++kyFavgk++kdq+e y +rkg
VIMSS218060 1129 LIKEQYSGIRPAPGYPACPDHTEKETLFRLLDGTAigetgPSGVYLTEHFAMFPAAAVSGWYFAHPQAKYFAVGKVDKDQIERYSARKG 1217
*******************************987622222478********************************************97 PP
Or compare VIMSS218060 to CDD or PaperBLAST