VIMSS218060 has 1235 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-126 405.7 0.0 8e-126 405.1 0.0 1.3 1 VIMSS218060
Domain annotation for each sequence (and alignments):
>> VIMSS218060
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 405.1 0.0 8e-126 8e-126 1 273 [] 941 1217 .. 941 1217 .. 0.96
Alignments for each domain:
== domain 1 score: 405.1 bits; conditional E-value: 8e-126
Met_synt_B12 1 dleelveyidWtpffqaWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnse.gddievyadesrseelatlhtLr 94
dl++l+eyidWtpff +W+l+gk+p+il+de+vge+a++l+kdA++mL+k+i+ekl++a+av+g++pAn++ +ddievy ++ + latlh+Lr
VIMSS218060 941 DLRTLAEYIDWTPFFISWDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVdDDDIEVYGEDG--QALATLHHLR 1033
6899******************************************************************94588***95555..679******* PP
Met_synt_B12 95 qqaekeegkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkelWgyakdeklsnee 189
qq+ k++gkpn +laDfvapk+sgv+Dy+G+F++tag+g+ee+ak+++++ ddYs+i+vkaladrLaeA+ae+lhe+vrke+Wgya+de+l+ne+
VIMSS218060 1034 QQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAYQDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEA 1128
*********************************************************************************************** PP
Met_synt_B12 190 likekYqgiRpApGYpacpdhtekktlfelldaee.....kigieLteslamtPaasvsGlyfahpearyFavgkiekdqvedyakrkg 273
like+Y+giRpApGYpacpdhtek+tlf+lld ++ g+ Lte++am Paa+vsG+yfahp+a+yFavgk++kdq+e y +rkg
VIMSS218060 1129 LIKEQYSGIRPAPGYPACPDHTEKETLFRLLDGTAigetgPSGVYLTEHFAMFPAAAVSGWYFAHPQAKYFAVGKVDKDQIERYSARKG 1217
*******************************987622222478********************************************97 PP
Or compare VIMSS218060 to CDD or PaperBLAST