VIMSS2195610 has 641 amino acids
Query: DUF1302 [M=541]
Accession: PF06980.17
Description: Protein of unknown function (DUF1302)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-185 603.8 12.0 2.4e-185 603.6 12.0 1.0 1 VIMSS2195610
Domain annotation for each sequence (and alignments):
>> VIMSS2195610
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 603.6 12.0 2.4e-185 2.4e-185 4 541 .] 13 641 .] 10 641 .] 0.96
Alignments for each domain:
== domain 1 score: 603.6 bits; conditional E-value: 2.4e-185
DUF1302 4 alaaalaallaagpaqAveseeddgvegsldttlsygagvrtedrdpsligkanggaaasangddGnlnfdkgdlvsnrlkatseldlkygnygffv 100
+ +a+ +a ++a+pa v +++ +++egs+d+ ls+ga++ t +++++lig++ngg+ s ++dd+ lnf++g+++s+++k+ ++l+lkyg+ g+f+
VIMSS2195610 13 LPLAVSLASSLAAPAFGV-TFNIGEIEGSFDSALSVGASWSTAKPNKNLIGVNNGGKGLSQTSDDSHLNFKRGETFSKVFKGIHDLELKYGDTGVFL 108
557888999999999999.****************************************************************************** PP
DUF1302 101 rgkafyDavydnknedesaaatnknsqagngdsddardeagrgaelldaYvygsfdlgdrplsvRlGrQvvnWGeslfvlnGinqinplDvsklrrp 197
rgk++yD+ ++++++++++ +ds+ + ++ +gaellda++y+++++gd p svRlG+QvvnWGes+f++nGi++inp+Dv+++rrp
VIMSS2195610 109 RGKYWYDFELKDEHREFKDI----------DDSGRKTLAKSSGAELLDAFIYHNYAIGDLPGSVRLGKQVVNWGESTFIQNGISAINPIDVTAFRRP 195
****************9755..........34999************************************************************** PP
DUF1302 198 GaelkeallPvpmvsaslqltdglsleafyqfeweptrlppvGtFfstsdivgpgaeglllangnaaal....................tgsaagtv 274
G+e+ke l+Pv+m+++s +ltd+ls+e+fyq ew++t+++++GtFfs+ d+v +g+++ l++ +n++a + +g++
VIMSS2195610 196 GSEIKEGLIPVNMFYLSQNLTDNLSAEGFYQIEWDQTVVDNCGTFFSQPDVVADGCDQNLAVLTNNKASinllnnvlagaglsvtpspwD---EGIL 289
***********************************************************99999988879***************96552...799* PP
DUF1302 275 vpraadkepsdsgqwGlalrylaeel.tefglyylnyhsrlPvls............................gasaavdadnaayfleYpedikly 342
v+r +d++++dsgq+G+alry+a+el tefg+yy+nyhsrlP++s a+aa++a n++yf+eYpedi+++
VIMSS2195610 290 VRRGPDRDARDSGQYGFALRYFADELnTEFGAYYMNYHSRLPIFSgqgasastmaaindlatrlaainpalaaQAAAAATAGNSSYFIEYPEDIRMF 386
************************************************************************9889999****************** PP
DUF1302 343 GaSfnttlgg.gtavagEvsYrpdaplqvntadllaaalaptaplpl..............eyvrgyergdvlqaqlg........lgadsltlvaE 416
G+Sf+ttl gta++gEvsYrp+ap+q+nt+d l+a+l p + ++ ++++gy r++++q+q + +ga ltlv+E
VIMSS2195610 387 GLSFSTTL-PnGTAWSGEVSYRPNAPVQLNTTDILFAGLDPVSIGGNrpydnasvlngqagQDLHGYRRKEITQLQTTlthffdqvMGAERLTLVGE 482
********.66*****************************9999999**************************************9999******** PP
DUF1302 417 vavthvpdlpdde.................................gsdsaagnaagcaadgyatrfswGyrlvleltyndvlpgldlspsisfshd 480
+++thv +l++++ g+ +a++ +c++dgy t+++wGyr+++ ++yndv+ g++l+ps+++shd
VIMSS2195610 483 IGWTHVGGLESTSkarygrdpvfgpgplpgtisglascqalnistlGTAEANNVSRYCENDGYTTSDAWGYRARAIWDYNDVFMGVNLKPSVAWSHD 579
***********************************999999888666666666666***************************************** PP
DUF1302 481 vkGnspdag..fveGrkavslgltfdylsnwkvdlgytaffggddqnalrDrDfvslsvkysF 541
v+G+sp++g f eGrkavslg++++y+++++++l+yt+ff+g++ ++ DrDfv+ls++ +F
VIMSS2195610 580 VDGYSPGPGanFEEGRKAVSLGVDAEYQNTYTASLSYTNFFDGKY-TTVDDRDFVALSFGMNF 641
********************************************7.69999*********999 PP
Or compare VIMSS2195610 to CDD or PaperBLAST