PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS219567 to PF07867 (DUF1654)

VIMSS219567 has 86 amino acids

Query:       DUF1654  [M=70]
Accession:   PF07867.15
Description: Protein of unknown function (DUF1654)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      7e-37  111.4   0.0    8.2e-37  111.2   0.0    1.1  1  VIMSS219567  


Domain annotation for each sequence (and alignments):
>> VIMSS219567  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.2   0.0   8.2e-37   8.2e-37       1      70 []      16      85 ..      16      85 .. 0.98

  Alignments for each domain:
  == domain 1  score: 111.2 bits;  conditional E-value: 8.2e-37
      DUF1654  1 tsyerlgaRvqriinaPaaQksrvavvlrlegeseedWarlleelaeteevelafqdDgsvrvrWerple 70
                 ts+++l+aR+q+iin+PaaQk+rvav+++++ges+edW++l+e++++te+v+laf+dDg+vrv+We+ple
  VIMSS219567 16 TSFDLLAARIQKIINSPAAQKNRVAVIYKAPGESQEDWGALVEAMEGTEGVSLAFEDDGGVRVTWEKPLE 85
                 79*****************************************************************976 PP



Or compare VIMSS219567 to CDD or PaperBLAST