VIMSS2195910 has 615 amino acids
Query: ABC_transp_aux [M=266]
Accession: PF09822.13
Description: ABC-type uncharacterized transport system
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.2e-75 238.4 0.0 1.2e-74 237.2 0.0 1.6 2 VIMSS2195910
Domain annotation for each sequence (and alignments):
>> VIMSS2195910
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 237.2 0.0 1.2e-74 1.2e-74 1 266 [] 33 301 .. 33 301 .. 0.93
2 ? -2.9 0.1 0.2 0.2 204 219 .. 542 557 .. 513 580 .. 0.70
Alignments for each domain:
== domain 1 score: 237.2 bits; conditional E-value: 1.2e-74
ABC_transp_aux 1 RlDlTedkrytLseatkellksleepvtitvylsgdl..lpaelkrlqkevrelLeeyaaysngkikvefidpeeeseeeeeaeallgiqpteie 93
RlDlTe+k+yt+s++tk++l++l+ep+++++++s++ ++l++++++v+elL+ y++++ng+i++++idpe++se+e++a++ +g+q ++++
VIMSS2195910 33 RLDLTEQKLYTISPGTKRILAGLDEPINLYFFYSDSGarELVPLRNYARRVEELLRAYEREANGRIRLQVIDPEPFSENEDKATE-FGLQGIPLQ 126
9***********************************9995578******************************************.7******** PP
ABC_transp_aux 94 veengkssqervypgavis.ygdkeevipllknnseenlEyeltsaikkltkkekpkigvlt.....ghgelsds..seladlleelsenyevee 180
+ + +++y+g++ s + d +vip++ ++ee+lEy++++++++l+++++p++g+++ g ++ + ++ ++++ee+++++++++
VIMSS2195910 127 QGG------DNLYFGLAGSnALDGVQVIPFFPLDQEEFLEYDISRLVQTLAQPQRPVVGLMSslplnGGFDMASRqpTSPWMVMEEIRQQFDLRS 215
**8......9********999****************************************9777664444444489677*************** PP
ABC_transp_aux 181 vdldseaelpeevdvlviakptkalseeekyaldqflmnGgkllvlldpvaveldslk..ealaaprdsnledlLekyGvrinpdlVl 266
++ d++++ p+ev+vl+++ ++k+l+e+++ya+dqf+++Ggkll+++dp+++ + + +l +++s+l +l+e++G+r+ p+ Vl
VIMSS2195910 216 LKSDATEI-PPEVSVLLLV-HPKQLPEQTLYAIDQFVLRGGKLLAFVDPFSEADSGSDfaATLDGDKSSDLAPLFEAWGLRLLPGKVL 301
****8887.9*********.*******************************9883333677999999***************999885 PP
== domain 2 score: -2.9 bits; conditional E-value: 0.2
ABC_transp_aux 204 alseeekyaldqflmn 219
+l++e++ ++q++++
VIMSS2195910 542 ELTPEQQATVRQYMQE 557
4566666666666654 PP
Or compare VIMSS2195910 to CDD or PaperBLAST