VIMSS2196539 has 367 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-24 71.0 0.2 8.8e-24 70.4 0.2 1.2 1 VIMSS2196539
Domain annotation for each sequence (and alignments):
>> VIMSS2196539
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 70.4 0.2 8.8e-24 8.8e-24 1 73 [. 165 254 .. 165 268 .. 0.85
Alignments for each domain:
== domain 1 score: 70.4 bits; conditional E-value: 8.8e-24
UPF0020 1 RgyRvfngpapLketLAaalvrlagw....kdgepllDPmCGsGtilIEaallganiapgllrefvye.............lkaeaeeea 73
RgyR +g apLke+LAaa + +agw +g l+DPmCG Gt+l+Eaal++a+iap l re++++ l++ea+++a
VIMSS2196539 165 RGYRLQQGAAPLKENLAAAVLIRAGWpkiaAEGGALADPMCGVGTFLVEAALMAAHIAPNLRRERWGFsnwlghvpalwrqLHEEAQQRA 254
9*************************5554579***********************************9999998886555444444433 PP
Or compare VIMSS2196539 to CDD or PaperBLAST