VIMSS220559 has 248 amino acids
Query: DUF3298 [M=83]
Accession: PF11738.12
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-15 43.4 0.1 9.7e-15 41.7 0.0 1.9 3 VIMSS220559
Domain annotation for each sequence (and alignments):
>> VIMSS220559
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.7 0.0 1 1 3 14 .. 22 31 .. 21 33 .. 0.80
2 ? -2.1 0.0 0.44 0.44 13 34 .. 65 86 .. 61 117 .. 0.57
3 ! 41.7 0.0 9.7e-15 9.7e-15 2 82 .. 157 232 .. 156 233 .. 0.87
Alignments for each domain:
== domain 1 score: -3.7 bits; conditional E-value: 1
DUF3298 3 lFkpgsdyleal 14
lF+p+ y+++l
VIMSS220559 22 LFTPN--YRAPL 31
89999..88876 PP
== domain 2 score: -2.1 bits; conditional E-value: 0.44
DUF3298 13 alselikkqlkkqaeeqeleey 34
+l+ +++k l + +e+++ ++
VIMSS220559 65 KLDGIVEKRLLQLTEDNQHGTA 86
5555666666555544443333 PP
== domain 3 score: 41.7 bits; conditional E-value: 9.7e-15
DUF3298 2 DlFkpgsdylealselikkqlkkqaeeqeleeyeeleee.fdaddisaydnFyltddglvfyfnpYeiaPyaaGaieftiPy 82
D+++pg +++++++ +++ ++++ +++ e +++ ++++ + +lt ++v+ + Y iaPy++G +e++iPy
VIMSS220559 157 DMLVPG--QEDTFWKTVEESHRAWLMSVGMDKDA----EfVKTWPFKKSPHVALTYGAVVVKYEVYAIAPYSMGHVELKIPY 232
9999**..*****************533333333....23679**************************************9 PP
Or compare VIMSS220559 to CDD or PaperBLAST