VIMSS227784 has 617 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-240 783.5 1.1 5.9e-240 783.3 1.1 1.0 1 VIMSS227784
Domain annotation for each sequence (and alignments):
>> VIMSS227784
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 783.3 1.1 5.9e-240 5.9e-240 2 542 .. 18 612 .. 17 613 .. 0.96
Alignments for each domain:
== domain 1 score: 783.3 bits; conditional E-value: 5.9e-240
TIGR00110 2 arallkatGlkdedle.kPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
aral++a G+ +d++ kPiiav+ns+te+vPgh hl+ ++++v+e+i+aaGg+a efntiav+DGiamgh+Gm+ysLpsr++iaDsve++v+ah++D
VIMSS227784 18 ARALMRASGVPGADIGrKPIIAVANSFTEFVPGHTHLQPVGRIVSEAITAAGGIAREFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVEAHCAD 115
79************9648******************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktkl.sekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
al++is+CDki+PGmlmaalrlniP+++vsGGpme+g+ +l + ++d+++a+ + ++k+s+e++ +ie++acPt+gsCsG+ftansm+cltea+
VIMSS227784 116 ALICISNCDKITPGMLMAALRLNIPTVFVSGGPMESGRATLvDGTVRTLDLVDAISDAVNDKISDEDILRIEENACPTCGSCSGMFTANSMNCLTEAI 213
**************************************9983557999************************************************** PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvP 286
GlslPg++++lat++ +k l + +++++v++++++++ Pr+i+t++afena++ld+a+GGstnt+Lhlla+a+eagv + ld+++++sr+vP
VIMSS227784 214 GLSLPGNGSVLATHTARKGLYEDAARTVVDITRRYYEqddesvlPRNIATHAAFENAMALDIAMGGSTNTILHLLAAAQEAGVPFGLDEINEVSRRVP 311
************************************************************************************************** PP
TIGR00110 287 llaklkPsg....kkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr..................................vd 346
+lak++P+ +++ed+hraGG++a+l+el+++gll++d+++v +l++ l++ +v+ +
VIMSS227784 312 CLAKVAPNVakdrTYYMEDVHRAGGIPALLGELHRAGLLNEDVHSVHSPSLSDWLKTWDVRAgspspeaielwhaapgcvrsseafsqserwealdE- 408
*******862222467*********************************************9*******************************9663. PP
TIGR00110 347 qd....virsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsal 440
d +irs +++++k+gglavLkGnla +G+vvk+agv+e+i++feGpa v es++ea++ il++++++GdvvviryeGPkGgPGm+emL+Pts+l
VIMSS227784 409 -DaeggCIRSAEHAYSKDGGLAVLKGNLAVDGCVVKTAGVDESIWTFEGPAVVCESQDEAVDKILRKEITHGDVVVIRYEGPKGGPGMQEMLYPTSFL 505
.44477******************************************************************************************** PP
TIGR00110 441 vglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.....revkgaLakyaklvs 533
+g GLgk++aLitDGrfsGgt+GlsiGh sPeaa+gG+ialv+dGD+i+iDi+nr++dl v+e+el +r ++ + a r+v+ aL++ya +++
VIMSS227784 506 KGRGLGKTCALITDGRFSGGTSGLSIGHASPEAASGGTIALVQDGDRIRIDIPNRTIDLLVDEAELSRRDQALNGVYApvnreRKVSAALRAYAAMAT 603
*********************************************************************8887654334566699************* PP
TIGR00110 534 sadkGavld 542
sadkGav+d
VIMSS227784 604 SADKGAVRD 612
*******97 PP
Or compare VIMSS227784 to CDD or PaperBLAST