VIMSS234159 has 563 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-67 212.3 5.3 4e-66 208.8 5.3 2.1 1 VIMSS234159
Domain annotation for each sequence (and alignments):
>> VIMSS234159
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 208.8 5.3 4e-66 4e-66 1 255 [. 169 432 .. 169 437 .. 0.91
Alignments for each domain:
== domain 1 score: 208.8 bits; conditional E-value: 4e-66
RACo_C_ter 1 eislliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpet.......levelkvignek..................... 70
e+s+++D+GTNaE+++++ d+++++saaaGPA+EG++i+cGm A+pgAi++v+++++ ++l+v++++
VIMSS234159 169 EVSIVTDYGTNAEMAIKTGDRIITGSAAAGPAIEGQGISCGMIASPGAISDVNLEKKRiekdiekDCWRLTVLDEKMegrpgalidpvtgetvergei 266
689*****************************************************994444333334444444443788999999999999999999 PP
RACo_C_ter 71 .pkGicGsGiidliaelleagiidkkgklnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidk 167
++Gi+G+G+i++ia ++e+g++++ kl ++ l l + i it++Di e+ +a++Ai+a+ tLl e+g+ +e++++
VIMSS234159 267 eAVGITGTGVIAVIALAMETGLMEQPPKL---------------PDGRLILG------NGIEITDADIAEAGKAIGAIRAAQLTLLLEAGVPFEELEN 343
9****************************...............33444444......38************************************** PP
RACo_C_ter 168 vylaGafGsyidlekAitiGllPdlelekvkqvGNtslagAraallsreareeleeiarki..tyielavekkFmeefvaalflphtdle 255
vy++Ga+G+y+d +kA +iG +Pd +k +q+GNts+a Ar++ll+++++ e+ ++ar+i +++++a++++F++ ++ +l++++++++
VIMSS234159 344 VYMSGASGTYVDCRKARKIGSCPD-FSKKAVQFGNTSIALARELLLDESRLGEVIALARTIkaDHLMMATSETFKNIYTCELSYWTEGMS 432
************************.7888999*****************************989**********************9996 PP
Or compare VIMSS234159 to CDD or PaperBLAST