VIMSS235586 has 140 amino acids
Query: UPF0047 [M=117]
Accession: PF01894.22
Description: Uncharacterised protein family UPF0047
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.8e-36 109.7 0.0 5.6e-36 109.5 0.0 1.0 1 VIMSS235586
Domain annotation for each sequence (and alignments):
>> VIMSS235586
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.5 0.0 5.6e-36 5.6e-36 1 117 [] 20 136 .. 20 136 .. 0.96
Alignments for each domain:
== domain 1 score: 109.5 bits; conditional E-value: 5.6e-36
E-HHHHHHHHHHHT-SEEEEEEEESSSSEEEEEEESSSHHHHHHHHHHHHHHSTTTST-GGG.TTS..THHHHHHHHHH-SEEEEEEETTEE---TTE CS
UPF0047 1 diteeveeavkesgikeGlvlvfvphttaaltinEnadpdvrkDleealeklvpedeeyrhn.aegednadaHlkssllgssltipvedgklalGtwq 97
dite v+e vk+s+i++G+v+vf+ +t a+ ++E ++++ kD++e+le+l+p +++y+h+ + g+ n+ +Hl+s l+g+slt+p+ + +l+lGtwq
VIMSS235586 20 DITEMVSEEVKNSKIRNGTVTVFCIGSTGAISTMEF-ESNLSKDISEMLEELIPLNKDYHHHkTWGDYNGGSHLRSFLVGPSLTVPFIEKELTLGTWQ 116
7**********************************9.********************9*999766888****************************** PP
EEEEEESS-SSEEEEEEEEE CS
UPF0047 98 giylvEfdgpreeRkvvvki 117
+i++++fd+ + Rk+v++i
VIMSS235586 117 QIVYINFDRIEKVRKIVLQI 136
********88888****986 PP
Or compare VIMSS235586 to CDD or PaperBLAST