VIMSS236434 has 132 amino acids
Query: UPF0047 [M=117]
Accession: PF01894.22
Description: Uncharacterised protein family UPF0047
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-46 142.7 0.0 3.4e-46 142.5 0.0 1.0 1 VIMSS236434
Domain annotation for each sequence (and alignments):
>> VIMSS236434
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 142.5 0.0 3.4e-46 3.4e-46 1 117 [] 15 128 .. 15 128 .. 0.97
Alignments for each domain:
== domain 1 score: 142.5 bits; conditional E-value: 3.4e-46
E-HHHHHHHHHHHT-SEEEEEEEESSSSEEEEEEESSSHHHHHHHHHHHHHHSTTTST-GGG.TTS..THHHHHHHHHH-SEEEEEEETTEE---TTE CS
UPF0047 1 diteeveeavkesgikeGlvlvfvphttaaltinEnadpdvrkDleealeklvpedeeyrhn.aegednadaHlkssllgssltipvedgklalGtwq 97
dit+e +e v+ sgi+eG++++ ++htta+++inEn ++++++D+ ++le+lvp + y+h+ +++ nadaHlk++llg+s+t+pv +gkl+lGtwq
VIMSS236434 15 DITQEAQEEVRISGIQEGICIISARHTTAGIIINEN-ESGLKEDILNLLERLVPPGAGYKHDrIDN--NADAHLKAVLLGTSETLPVVQGKLELGTWQ 109
7***********************************.*************************5555..****************************** PP
EEEEEESS-SSEEEEEEEEE CS
UPF0047 98 giylvEfdgpreeRkvvvki 117
+i+++E+dgpr+ R+v ++i
VIMSS236434 110 SIFFAEMDGPRQ-RTVNLTI 128
***********8.***9986 PP
Or compare VIMSS236434 to CDD or PaperBLAST