VIMSS237193 has 546 amino acids
Query: RACo_C_ter [M=261] Accession: PF14574.10 Description: C-terminal domain of RACo the ASKHA domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.2e-71 225.5 1.6 1.2e-70 223.6 1.6 1.9 1 VIMSS237193 Domain annotation for each sequence (and alignments): >> VIMSS237193 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 223.6 1.6 1.2e-70 1.2e-70 2 260 .. 174 432 .. 173 433 .. 0.92 Alignments for each domain: == domain 1 score: 223.6 bits; conditional E-value: 1.2e-70 RACo_C_ter 2 islliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignek......................pkGicGs 77 +s+ +D+GTNaE++l+ kd ++++saaaGPAlEG++ik+G+ A+p Ai+++e+++ l+ v+++e +kGi+G+ VIMSS237193 174 VSIATDYGTNAEMALKVKDIIYTGSAAAGPALEGQQIKHGTLASPFAISDFEFEDGALRN--YVLNEEMkpdpgdlvdpktgeileagqiqAKGITGT 269 7899***************************************************99444..34433323588888999999999999999******* PP RACo_C_ter 78 GiidliaelleagiidkkgklnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGafG 175 G+i+li+++l + ++ k+ +t++ +++l++ +i+++e+D++e+ +a++Ai+ag+ tL+ ++g+e++did y+aGa G VIMSS237193 270 GVIALIEKALGHDLVVLP-KI-------------KTPDELIHLQN------KITFSERDLKEAGKAIGAIRAGHITLCATAGIELTDIDAAYMAGAAG 347 **************9664.66.............57888999986......8********************************************** PP RACo_C_ter 176 syidlekAitiGllPdlelekvkqvGNtslagAraallsreareeleeiarki..tyielavekkFmeefvaalflphtdlelfpsv 260 +y+d++kA++iGl+P + ++ q+GNtsla+Ar++lls+ +++el++ia++i t+i++a++++F + +v +l+++++++ +f+++ VIMSS237193 348 TYMDAKKAQKIGLIPY-STGNIAQLGNTSLAVAREILLSEGRLWELQDIASQIigTHIMFATAPEFRDAYVLELAYWEEGM-PFKMF 432 ****************.99************************************************************99.78875 PP
Or compare VIMSS237193 to CDD or PaperBLAST