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Align VIMSS237193 to PF14574 (RACo_C_ter)

VIMSS237193 has 546 amino acids

Query:       RACo_C_ter  [M=261]
Accession:   PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.2e-71  225.5   1.6    1.2e-70  223.6   1.6    1.9  1  VIMSS237193  


Domain annotation for each sequence (and alignments):
>> VIMSS237193  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.6   1.6   1.2e-70   1.2e-70       2     260 ..     174     432 ..     173     433 .. 0.92

  Alignments for each domain:
  == domain 1  score: 223.6 bits;  conditional E-value: 1.2e-70
   RACo_C_ter   2 islliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignek......................pkGicGs 77 
                  +s+ +D+GTNaE++l+ kd ++++saaaGPAlEG++ik+G+ A+p Ai+++e+++  l+    v+++e                       +kGi+G+
  VIMSS237193 174 VSIATDYGTNAEMALKVKDIIYTGSAAAGPALEGQQIKHGTLASPFAISDFEFEDGALRN--YVLNEEMkpdpgdlvdpktgeileagqiqAKGITGT 269
                  7899***************************************************99444..34433323588888999999999999999******* PP

   RACo_C_ter  78 GiidliaelleagiidkkgklnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGafG 175
                  G+i+li+++l + ++    k+             +t++ +++l++      +i+++e+D++e+ +a++Ai+ag+ tL+ ++g+e++did  y+aGa G
  VIMSS237193 270 GVIALIEKALGHDLVVLP-KI-------------KTPDELIHLQN------KITFSERDLKEAGKAIGAIRAGHITLCATAGIELTDIDAAYMAGAAG 347
                  **************9664.66.............57888999986......8********************************************** PP

   RACo_C_ter 176 syidlekAitiGllPdlelekvkqvGNtslagAraallsreareeleeiarki..tyielavekkFmeefvaalflphtdlelfpsv 260
                  +y+d++kA++iGl+P  +  ++ q+GNtsla+Ar++lls+ +++el++ia++i  t+i++a++++F + +v +l+++++++ +f+++
  VIMSS237193 348 TYMDAKKAQKIGLIPY-STGNIAQLGNTSLAVAREILLSEGRLWELQDIASQIigTHIMFATAPEFRDAYVLELAYWEEGM-PFKMF 432
                  ****************.99************************************************************99.78875 PP



Or compare VIMSS237193 to CDD or PaperBLAST