VIMSS237193 has 546 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.11
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.1e-71 224.2 1.6 3.3e-70 222.2 1.6 1.9 1 VIMSS237193
Domain annotation for each sequence (and alignments):
>> VIMSS237193
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 222.2 1.6 3.3e-70 3.3e-70 2 260 .. 174 432 .. 173 433 .. 0.92
Alignments for each domain:
== domain 1 score: 222.2 bits; conditional E-value: 3.3e-70
RACo_C_ter 2 lslliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignek......................pkGicGs 77
+s+ +D+GTNaE++l+ kd ++++saaaGPAlEG++ik+G++A+p Ai+++e+++ l+ + + +kGi+G+
VIMSS237193 174 VSIATDYGTNAEMALKVKDIIYTGSAAAGPALEGQQIKHGTLASPFAISDFEFEDGALRNYVLNEE--MkpdpgdlvdpktgeileagqiqAKGITGT 269
7899***************************************************99544433333..23578888889999999999999******* PP
RACo_C_ter 78 GiidliaelleagiidkkgklnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagietLleevglevedidkvylaGafG 175
G+i+li+++l + ++ k+ +t++ +++l++ +i+++e+D++e+ +a++Ai+ag+ tL+ ++g+e++did y+aGa G
VIMSS237193 270 GVIALIEKALGHDLVVLP-KI-------------KTPDELIHLQN------KITFSERDLKEAGKAIGAIRAGHITLCATAGIELTDIDAAYMAGAAG 347
**************9765.66.............57888999986......8********************************************** PP
RACo_C_ter 176 syidiekAitiGllPdlelekvkqvGNtslagAraallsreareeleeiarki..tyielavekeFmdefvaalflphtdlelfpsv 260
+y+d++kA++iGl+P + ++ q+GNtsla+Ar++lls+ +++el++ia++i t+i++a+ +eF d +v +l+++++++ +f+++
VIMSS237193 348 TYMDAKKAQKIGLIPY-STGNIAQLGNTSLAVAREILLSEGRLWELQDIASQIigTHIMFATAPEFRDAYVLELAYWEEGM-PFKMF 432
****************.99************************************************************99.78875 PP
Or compare VIMSS237193 to CDD or PaperBLAST