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Align VIMSS237593 to PF14574 (RACo_C_ter)

VIMSS237593 has 539 amino acids

Query:       RACo_C_ter  [M=261]
Accession:   PF14574.10
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    9.1e-68  214.2   6.4    8.6e-67  211.0   6.8    2.2  2  VIMSS237593  


Domain annotation for each sequence (and alignments):
>> VIMSS237593  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.5   0.0     0.029     0.029     143     172 ..      57      86 ..      53      88 .. 0.82
   2 !  211.0   6.8   8.6e-67   8.6e-67       1     260 [.     169     428 ..     169     429 .. 0.93

  Alignments for each domain:
  == domain 1  score: -0.5 bits;  conditional E-value: 0.029
   RACo_C_ter 143 akaAiyagvktLleevglevedidkvylaG 172
                  a +   ++vk +l+e+g+e e+++k+ + G
  VIMSS237593  57 AHGLSATAVKNILTELGVEPEEMEKFSICG 86 
                  666667889999999999999999999988 PP

  == domain 2  score: 211.0 bits;  conditional E-value: 8.6e-67
   RACo_C_ter   1 eislliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignek......................pkGicG 76 
                  e+++ +D+GTNaE++l+++  ++++saaaGPAlEG+ei++G  A+p++i +ve++ e+  +++ v++++                       +kGi+G
  VIMSS237593 169 EVAIATDYGTNAEMALKSNGIIYTGSAAAGPALEGQEIEYGSIASPHTICDVEFEGEN--LRCYVLDRDMkttmgdlvnpktgevvekgevtAKGITG 264
                  67899****************************************************9..55555554434566666888888999999999****** PP

   RACo_C_ter  77 sGiidliaelleagiidkkgklnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagvktLleevglevedidkvylaGaf 174
                  +G+i+li++ +++++i    k+             +t+e +++l++       i +tekD+ ++ ra++A++ag+ tL+ ++g+e+ed++   ++Ga 
  VIMSS237593 265 TGVIALIEAGMRNKLIVLP-KI-------------QTPEKIIYLQN------GIKFTEKDLIAAGRAIGALRAGHITLCAAAGIEMEDLKVAHMSGAA 342
                  ****************664.66.............57888998886......8********************************************* PP

   RACo_C_ter 175 GsyidlekAitiGllPdlelekvkqvGNtslagAraallsreareeleeiarki..tyielavekkFmeefvaalflphtdlelfpsv 260
                  G+y+d++kA+++G++P  +++ v+q+GNtsl++Ar++lls+++++el++ia++i  t++++a++++F+e ++ +l+++++++ +f+++
  VIMSS237593 343 GTYMDAAKAHQVGMIPY-NANYVSQIGNTSLTVAREILLSEDRLWELQAIAKEIvgTHVMFATSEAFKEAYLLELAYWNEGM-AFKML 428
                  *****************.***************************************************************9.68775 PP



Or compare VIMSS237593 to CDD or PaperBLAST