VIMSS237593 has 539 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.11
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-67 212.8 6.6 2e-66 209.8 6.9 2.2 2 VIMSS237593
Domain annotation for each sequence (and alignments):
>> VIMSS237593
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.8 0.0 0.034 0.034 143 172 .. 57 86 .. 53 88 .. 0.80
2 ! 209.8 6.9 2e-66 2e-66 1 260 [. 169 428 .. 169 429 .. 0.92
Alignments for each domain:
== domain 1 score: -0.8 bits; conditional E-value: 0.034
RACo_C_ter 143 akaAiyagietLleevglevedidkvylaG 172
a + ++++ +l+e+g+e e+++k+ + G
VIMSS237593 57 AHGLSATAVKNILTELGVEPEEMEKFSICG 86
566667888999999999999999999988 PP
== domain 2 score: 209.8 bits; conditional E-value: 2e-66
RACo_C_ter 1 elslliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignek......................pkGicG 76
e+++ +D+GTNaE++l+++ ++++saaaGPAlEG+ei++G A+p++i +ve++ e+ +++ v++++ +kGi+G
VIMSS237593 169 EVAIATDYGTNAEMALKSNGIIYTGSAAAGPALEGQEIEYGSIASPHTICDVEFEGEN--LRCYVLDRDMkttmgdlvnpktgevvekgevtAKGITG 264
67899***************************************************99..55555544333456666788888888899999****** PP
RACo_C_ter 77 sGiidliaelleagiidkkgklnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagietLleevglevedidkvylaGaf 174
+G+i+li++ +++++i k+ +t+e ++ l++ i +tekD+ ++ ra++A++ag+ tL+ ++g+e+ed++ ++Ga
VIMSS237593 265 TGVIALIEAGMRNKLIVLP-KI-------------QTPEKIIYLQN------GIKFTEKDLIAAGRAIGALRAGHITLCAAAGIEMEDLKVAHMSGAA 342
****************775.66.............57888998886......8********************************************* PP
RACo_C_ter 175 GsyidiekAitiGllPdlelekvkqvGNtslagAraallsreareeleeiarki..tyielavekeFmdefvaalflphtdlelfpsv 260
G+y+d++kA ++G++P +++ v+q+GNtsl++Ar++lls+++++el++ia++i t++++a++++F++ ++ +l+++++++ +f+++
VIMSS237593 343 GTYMDAAKAHQVGMIPY-NANYVSQIGNTSLTVAREILLSEDRLWELQAIAKEIvgTHVMFATSEAFKEAYLLELAYWNEGM-AFKML 428
*****************.***************************************************************9.68775 PP
Or compare VIMSS237593 to CDD or PaperBLAST