VIMSS239549 has 258 amino acids
Query: UPF0227 [M=187]
Accession: PF05728.16
Description: Uncharacterised protein family (UPF0227)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-09 24.6 0.0 2.5e-09 23.5 0.0 1.5 1 VIMSS239549
Domain annotation for each sequence (and alignments):
>> VIMSS239549
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.5 0.0 2.5e-09 2.5e-09 41 182 .. 88 245 .. 72 252 .. 0.67
Alignments for each domain:
== domain 1 score: 23.5 bits; conditional E-value: 2.5e-09
UPF0227 41 dpqqalkeleklvaelgdekpllvGssLGGyyatrlgerf..glrq.vllnPalkpeenlagklgeqanqytgetyvleeyhiielkalevsr..... 130
d +q+l ++++ + e+++l G s+GG a ++ ++++ vl +Pa++ e + g + qy +e+ + + l+++r
VIMSS239549 88 DARQILDFVKRQPTTDV-ERIGLLGLSMGGAIAGIIARERkeDVKAlVLWAPAFNMPELIMGEGAR---QY---GAIMESLGYVDIGGLKLDRafved 178
55555555655555555.44****************97541156778999****999988655444...55...333444444444444444444566 PP
UPF0227 131 ..........lkrperilvllskqDevldy....rravaeyraaaeiveddg.dHkfkdfsrhlqqi 182
++++l++++++De ++y r ++ y + a +v +g dH fk+++ + ++i
VIMSS239549 179 iakfnifelsRGYEGKVLIVHGTNDEAVEYrisdRILQEVYGDNAFRVTIEGaDHTFKNLEWERKAI 245
6677777655555899**************44433345556555566755555******99776555 PP
Or compare VIMSS239549 to CDD or PaperBLAST