VIMSS239894 has 130 amino acids
Query: UPF0047 [M=117]
Accession: PF01894.22
Description: Uncharacterised protein family UPF0047
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-52 161.7 0.0 4.3e-52 161.5 0.0 1.0 1 VIMSS239894
Domain annotation for each sequence (and alignments):
>> VIMSS239894
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 161.5 0.0 4.3e-52 4.3e-52 1 117 [] 16 127 .. 16 127 .. 0.98
Alignments for each domain:
== domain 1 score: 161.5 bits; conditional E-value: 4.3e-52
E-HHHHHHHHHHHT-SEEEEEEEESSSSEEEEEEESSSHHHHHHHHHHHHHHSTTTST-GGGTTS..THHHHHHHHHH-SEEEEEEETTEE---TTEE CS
UPF0047 1 diteeveeavkesgikeGlvlvfvphttaaltinEnadpdvrkDleealeklvpedeeyrhnaegednadaHlkssllgssltipvedgklalGtwqg 98
dit+evee vk+sg+keG+++vfvphtta++tinEnadp+v++D+ +al+k++p+ +++h eg n+daH+k+sl+gss+t+ +e+g+l+lGtwqg
VIMSS239894 16 DITKEVEEEVKKSGVKEGICVVFVPHTTAGITINENADPTVKEDILSALDKIIPNI-SFKHL-EG--NSDAHIKASLVGSSVTVLIENGELVLGTWQG 109
8*****************************************************76.6***9.9*..******************************* PP
EEEEESS-SSEEEEEEEEE CS
UPF0047 99 iylvEfdgpreeRkvvvki 117
iy++Efdgpr+ Rkv++ki
VIMSS239894 110 IYFCEFDGPRR-RKVYIKI 127
**********8.****986 PP
Or compare VIMSS239894 to CDD or PaperBLAST