VIMSS242024 has 1170 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.3e-46 142.8 0.0 1.2e-45 142.1 0.0 1.3 1 VIMSS242024
Domain annotation for each sequence (and alignments):
>> VIMSS242024
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 142.1 0.0 1.2e-45 1.2e-45 47 256 .. 968 1168 .. 960 1170 .] 0.90
Alignments for each domain:
== domain 1 score: 142.1 bits; conditional E-value: 1.2e-45
Met_synt_B12 47 mLkkiieekllkakavvglfpansvgddievyadesrseelatlhtLrqqaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelake. 140
+L+++++++ll+a v+g fp+ s++dd++v +d+ ++ +++++ rq lclaDf +p+esg +D++G+ +vt+g i e +++
VIMSS242024 968 LLDRLQTDNLLEAAVVYGYFPCVSKDDDLIVLDDDGNE--RTRFTFPRQRRG-----RRLCLADFFRPEESGETDVVGFQVVTVGSRIGEETARm 1055
89*****************************8776644..578888888844.....57****************************97666651 PP
Met_synt_B12 141 feaeeDdYsa.ilvkalaDrLaeAfaellhekvrkelWgyakdeklsneelikekYqGiRpApGYpacpdhsekktlfelldaeekigieLtesl 234
fea+ Y++ + ++ l+ LaeA+ae+ h++vr e g+a ++ ++e++++ kY+G R + GY acpd + ++++ ll+ e+ ig++L+e++
VIMSS242024 1056 FEAN--AYRDyLELHGLSVQLAEALAEYWHARVRSE-LGFAGEDPAEMEDMFALKYRGARFSLGYGACPDLEDRAKIAALLEPER-IGVHLSEEF 1146
5555..6665155799*******************9.6**********************************************9.********* PP
Met_synt_B12 235 amtPaasvsGlyfahpeskyFa 256
++P++s ++++ hpe+kyF+
VIMSS242024 1147 QLHPEQSTDAIVIHHPEAKYFN 1168
*********************7 PP
Or compare VIMSS242024 to CDD or PaperBLAST