VIMSS243646 has 617 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.4e-235 766.7 1.4 7.4e-235 766.5 1.4 1.0 1 VIMSS243646
Domain annotation for each sequence (and alignments):
>> VIMSS243646
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 766.5 1.4 7.4e-235 7.4e-235 2 542 .. 18 612 .. 17 613 .. 0.96
Alignments for each domain:
== domain 1 score: 766.5 bits; conditional E-value: 7.4e-235
TIGR00110 2 arallkatGlkdedle.kPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
aral++a G+ +d++ kPiiav+ns+te+vPgh hl ++++v+e+++aaGg++ efntiav+DGiamgh+Gm+ysLpsr++iaDsve++v+ah++D
VIMSS243646 18 ARALMRASGVPGADIGrKPIIAVANSFTEFVPGHTHLAPVGRIVSEAVTAAGGIPREFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVEAHCAD 115
79************9648******************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktkl.sekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
al++is+CDki+PGml aalrlniP+++vsGGpme+g+ +l + ++d+++a+ e+ ++k+s++++ +ie++acPt+gsCsG+ftansm+cltea+
VIMSS243646 116 ALICISNCDKITPGMLNAALRLNIPTVFVSGGPMESGRATLvDGTVRTLDLVDAMSEAVNDKISDADILRIEENACPTCGSCSGMFTANSMNCLTEAI 213
**************************************9983557999************************************************** PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvP 286
GlslPg++++lat++ +k+l +++++++ +l++++++ Pr+i+t +af na++ld+a+GGstnt+Lhlla+a+ea+v++ l ++d lsr vP
VIMSS243646 214 GLSLPGNGSVLATHTARKTLYENAARTVLDLTRRYYEqdddsvlPRNIATPAAFGNAMALDIAMGGSTNTILHLLAAAQEAEVSYGLAEMDALSRSVP 311
************************************************************************************************** PP
TIGR00110 287 llaklkPsg....kkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr..................................vd 346
+lak++P+ +++ed+hraGG++a+l+el++ gll++d+++v +la+ l++ +v+ +
VIMSS243646 312 CLAKVAPNVakdrTYYMEDVHRAGGIPALLGELHRGGLLNEDVHSVHSPSLADWLKTWDVRGgspskeavelwhaapgcvrsaeafsqserwdtldE- 408
*******862222467********************************************9999*****************************9663. PP
TIGR00110 347 qd....virsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsal 440
d +irs++++++k+gglavL+Gnla +G+vvk+agv+e+i++feGpa v es+eea++ il+ +vkeGdvvviryeGPkGgPGm+emL+Pts+l
VIMSS243646 409 -DaeggCIRSVEHAYSKDGGLAVLRGNLAVDGCVVKTAGVDESIWTFEGPAVVCESQEEAVQKILTQQVKEGDVVVIRYEGPKGGPGMQEMLYPTSYL 505
.44477******************************************************************************************** PP
TIGR00110 441 vglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.....revkgaLakyaklvs 533
+g GLgk++aL+tDGrfsGgt+GlsiGh sPeaa+gG+ialvedGD+i+iDi+nr ++l v+++el +r ++ + a r+v+ aL++ya +++
VIMSS243646 506 KGRGLGKACALVTDGRFSGGTSGLSIGHASPEAAAGGTIALVEDGDRIRIDIPNRSIELLVDDAELTRREQALNGVYApknrdRKVSAALKAYAAMAT 603
*********************************************************************9986633223345599************* PP
TIGR00110 534 sadkGavld 542
sadkGav+d
VIMSS243646 604 SADKGAVRD 612
*******97 PP
Or compare VIMSS243646 to CDD or PaperBLAST