VIMSS246806 has 605 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-29 87.7 0.0 1.8e-28 86.1 0.0 1.8 1 VIMSS246806
Domain annotation for each sequence (and alignments):
>> VIMSS246806
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 86.1 0.0 1.8e-28 1.8e-28 1 198 [. 9 253 .. 9 254 .. 0.65
Alignments for each domain:
== domain 1 score: 86.1 bits; conditional E-value: 1.8e-28
DUF262 1 ledllskkksg.fliPdyQRgyvWdeeqvedLiedikelrgyplGsivlw................keaededgkyeviDGQQRltTltlllka.... 77
l+d+l + sg +++Pd+QR+++Wd+++++ i ++ ++yplG +++ +++ d + ++DGQQRlt+l++ l+
VIMSS246806 9 LKDVLADVASGsLQLPDFQRNWKWDDDRIRAIIATV--TLDYPLGVVMTLqtggatrfrsrtltgaQPDGDPAADLLLLDGQQRLTSLFQSLWLdapv 104
5788888888889***********************..*************************987667777******************99997777 PP
DUF262 78 ..................leed.....ekekeeeekl...klekreedkdffekllenekeelekleklkelngkkfkdl..seeekseseknlikay 147
+ + +e+ ++ k +++ ++ + +l +e e + l l+ + +++ +e ++ +ika
VIMSS246806 105 etadsrgkaiqrwyyvdiA--KavgpsADRDEAVVSVpadKVLRTDFNRTVVLDLSTTEAEC---AAGLFPLH------FvfDAQRVNEWKRAYIKAD 191
7777777766665544430..13333311122222221112222222222222222222222...22222222......0221111122222222222 PP
DUF262 148 elikek.........ai...eklklveielddeddedeafeiFerlNsrGvpLsaadllkall 198
e + + ++ +++++i l +++ d ++ +Fer+N++GvpL+ ++ll a +
VIMSS246806 192 EERN-WdrwgqfdeaVLqqvRAFQVPMIRLAASTSMDAVCAVFERVNTGGVPLNVFELLTATY 253
2222.1344444443223446899999999999**************************9987 PP
Or compare VIMSS246806 to CDD or PaperBLAST