PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS264665 to PF19468 (DUF6005)

VIMSS264665 has 327 amino acids

Query:       DUF6005  [M=327]
Accession:   PF19468.4
Description: Family of unknown function (DUF6005)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   2.5e-146  472.9   7.3   3.1e-146  472.6   7.3    1.0  1  VIMSS264665  


Domain annotation for each sequence (and alignments):
>> VIMSS264665  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  472.6   7.3  3.1e-146  3.1e-146       2     320 ..       4     322 ..       3     325 .. 0.99

  Alignments for each domain:
  == domain 1  score: 472.6 bits;  conditional E-value: 3.1e-146
      DUF6005   2 ikvHClvsclcevikreegvDhRpfYfgvwDadfavteegeltYhseeishefflkwyerlygvkvreWydkekskeenlatllelleekkeersvmv 99 
                  ikvHClvsc+ce+ikr++++D+RpfYfg+wD df++te g ++Yhse+i+h+++l wye+lyg+kv+eWyd++k+k++n++t+l+l+e+k+e+r+v+v
  VIMSS264665   4 IKVHCLVSCFCEIIKRRSDIDFRPFYFGLWDGDFDITEGGIISYHSENINHDHYLLWYEKLYGMKVNEWYDHAKDKDSNVETFLQLVENKPENRYVIV 101
                  9************************************************************************************************* PP

      DUF6005 100 mlDlsllPeRenkfnqkpFPHyvllektededewlmlDpDfRweGelekerileaiaqptvagGyvfdaeeirepseetveayfeaclkkdenpltea 197
                  m+D+sllPeRenkf+qkpFPHy+++++te+e+ew+mlDpDfRweG++e+e++l +++++ ++gGy++d eei+ep++e+v++yf +++k+++n+lt +
  VIMSS264665 102 MVDMSLLPERENKFHQKPFPHYLMISETEKEEEWFMLDPDFRWEGNMEREKVLYSVQDNPFGGGYFIDVEEIQEPTAEMVASYFIETFKRNDNELTME 199
                  ************************************************************************************************** PP

      DUF6005 198 vreiveahvegeeglelakleealrelpvlaiRKYayehalaffweeleleeeefeewcdeieelvkgyktvqyravklaktkdealleeilekldel 295
                  +++++ +++++eeg+ l+ l +a++++pvlaiRKY+yeha+a+f e+l+++e+ef+ wcd++e++v+g+++vqyra+k+a+t+++ +l +i+eklde+
  VIMSS264665 200 LKNLIIKMANEEEGYLLSGLVAAVKQIPVLAIRKYSYEHAFAYFRETLQYSEQEFDYWCDRVEDIVQGFTNVQYRAIKMAMTNNKGMLLSIVEKLDEM 297
                  ************************************************************************************************** PP

      DUF6005 296 delElkiKkeleelfekWrekqkek 320
                  +++El+iK+ele++f +W+e+++++
  VIMSS264665 298 NAIELQIKTELERQFLSWKEMKSNE 322
                  *******************998765 PP



Or compare VIMSS264665 to CDD or PaperBLAST