VIMSS27031 has 567 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.1e-39 121.3 4.5 3.1e-39 121.3 4.5 2.9 2 VIMSS27031
Domain annotation for each sequence (and alignments):
>> VIMSS27031
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 121.3 4.5 3.1e-39 3.1e-39 1 198 [. 5 213 .. 5 214 .. 0.75
2 ? -5.4 8.3 1 1 117 178 .. 295 371 .. 258 554 .. 0.70
Alignments for each domain:
== domain 1 score: 121.3 bits; conditional E-value: 3.1e-39
DUF262 1 ledllskkksgfliPdyQRgyvWdeeqvedLiedike.......lrgyplGsivlwkeaededgkyeviDGQQRltTltlllka.....lee.d...ek 83
++++++++ + iP+yQR+y+W++++ +dL+ed++e g+++G++v+ ++ed+++ y++iDGQQR+tT+++ll++ +ee + +k
VIMSS27031 5 IKEIFQEEG--YSIPNYQRDYAWKDKNFRDLWEDLEEaieynkkGYGHFIGTMVV-AKNEDNKKLYDIIDGQQRTTTIFMLLHVlvskqYEEdKretRK 100
688999876..9***********************99******99**********.778888**********************665542223134466 PP
DUF262 84 ekeeeeklklekreedkdffekllenekeelek.leklkelngkkfkdlseeekseseknlikayelikek..............aieklklveieldd 167
+ +++ +lkle ++++ff++lle +++ +++ +ek + ++e ++nl +++++i +k + lk+v l++
VIMSS27031 101 YLYQKGELKLEVASQNQSFFKTLLEVAEKGNIShCEK--------------DADTEGKQNLFEVLKAILDKisklseeevnerleV--LLKMVLMRLEE 183
6777777778888888888888888777776664433..............33344444444444444444454566677665432..35566666664 PP
DUF262 168 eddedeafeiFerlNsrGvpLsaadllkall 198
d+ +a + F+++N+rGvpL d+lk+ll
VIMSS27031 184 -PDPGKAIRTFQSVNDRGVPLLLLDKLKSLL 213
.78899**********************998 PP
== domain 2 score: -5.4 bits; conditional E-value: 1
DUF262 117 leklkelngkkfkdlseeekseseknlikayelikek..................aieklklveielddeddedeafeiF 178
+ +lke ++ k k + ++ s+ ++ ++ ++l+ e+ + +l+++++++e d de ++F
VIMSS27031 295 KAELKEIKKSKLKSFIQSYVSDLKNFYQAFLDLLSEIdtnpttlkvmlinrinplF--FNSLIRLKINNELD-DETLKLF 371
33333333333333333333444444444433333334445544444443333221..23333333333322.3344444 PP
Or compare VIMSS27031 to CDD or PaperBLAST