VIMSS271120 has 212 amino acids
Query: DUF1120 [M=116]
Accession: PF06551.16
Description: Protein of unknown function (DUF1120)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.1e-12 31.8 4.7 1.2e-10 27.8 0.9 2.5 2 VIMSS271120
Domain annotation for each sequence (and alignments):
>> VIMSS271120
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 27.8 0.9 1.2e-10 1.2e-10 1 68 [. 30 98 .. 30 106 .. 0.91
2 ! 6.4 0.3 0.00056 0.00056 95 115 .. 101 121 .. 96 122 .. 0.83
Alignments for each domain:
== domain 1 score: 27.8 bits; conditional E-value: 1.2e-10
DUF1120 1 lkvtGeltagaCtPvlsgGGvvdyGtkavsaLsa.tklnqlGtkditltitCeaatkiavtakDnrads 68
lkv+G++t+ +Ct v + G+ d G+ + s +++ t ++ l + + t t++C a t + +t Dnr s
VIMSS271120 30 LKVVGTMTVPSCTVVSPDAGIYDIGKLSSSLVKPgTTVTVLAQINKTWTVNCDANTYLNFTPVDNRVGS 98
79*****************************9984588999*************************988 PP
== domain 2 score: 6.4 bits; conditional E-value: 0.00056
DUF1120 95 kqttrafGlGktkdgkkiGay 115
++ afGlGk +d kiG y
VIMSS271120 101 DGSAAAFGLGKINDTGKIGYY 121
567789*************87 PP
Or compare VIMSS271120 to CDD or PaperBLAST