VIMSS273187 has 391 amino acids
Query: DUF418 [M=163]
Accession: PF04235.16
Description: Protein of unknown function (DUF418)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-51 159.6 17.9 3.5e-51 159.6 17.9 2.3 4 VIMSS273187
Domain annotation for each sequence (and alignments):
>> VIMSS273187
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.2 0.1 0.2 0.2 61 61 .. 63 63 .. 9 96 .. 0.52
2 ? -2.1 0.1 0.18 0.18 36 36 .. 82 82 .. 47 128 .. 0.57
3 ? -1.5 0.1 0.12 0.12 12 35 .. 130 153 .. 120 164 .. 0.56
4 ! 159.6 17.9 3.5e-51 3.5e-51 1 161 [. 219 377 .. 219 379 .. 0.99
Alignments for each domain:
== domain 1 score: -2.2 bits; conditional E-value: 0.2
DUF418 61 l 61
+
VIMSS273187 63 V 63
1 PP
== domain 2 score: -2.1 bits; conditional E-value: 0.18
DUF418 36 a 36
VIMSS273187 82 K 82
2 PP
== domain 3 score: -1.5 bits; conditional E-value: 0.12
DUF418 12 ehkrllrrllliglavglplalll 35
+ ++ l r+ +++ ++g+++ lll
VIMSS273187 130 KDAASLLRTGAVLYLIGVAVLLLL 153
334444444455555555555544 PP
== domain 4 score: 159.6 bits; conditional E-value: 3.5e-51
DUF418 1 lgrkgllkdgeehkrllrrllliglavglplallla.llaelaeesallslllevlsmlgglalalgYvalillllkkekrrrllrplaavGRmALTn 97
l+r+g+l+ g+ + r++rrl+l+++ ++l+++++ + l+++++++++++++ll+v ++lg++++a+gY+al++ ++++ +r+++ ++la+vGRmAL+n
VIMSS273187 219 LMRCGWLR-GKFSLRHYRRLALFLISLSLVIQIPGVaLQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISHWLAKVGRMALSN 315
69******.***************************************************************************************** PP
DUF418 98 YllqsivctllfygyglglfgslgrlallllallifllqlllSklwlrrfrqGPlEwlwRklty 161
Yllq+++ctl+f y++gl+++l+rl+ll+++ l++++++++S lwlr+f qGP+EwlwR+lt
VIMSS273187 316 YLLQTLICTLIF--YHFGLYQQLDRLQLLAVVPLVWACNVIFSLLWLRYFVQGPVEWLWRRLTA 377
************..9999********************************************96 PP
Or compare VIMSS273187 to CDD or PaperBLAST