VIMSS27426 has 683 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-37 114.1 5.0 5e-37 114.1 5.0 2.4 2 VIMSS27426
Domain annotation for each sequence (and alignments):
>> VIMSS27426
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.1 5.0 5e-37 5e-37 9 199 .] 16 218 .. 8 218 .. 0.79
2 ? -1.4 0.6 0.12 0.12 108 108 .. 559 559 .. 424 630 .. 0.61
Alignments for each domain:
== domain 1 score: 114.1 bits; conditional E-value: 5e-37
DUF262 9 ksgfliPdyQRgyvWdeeqvedLiedike....lrgyplGsivlw.....keaede...dgkyeviDGQQRltTltlllka.........leed....e 82
f iP yQR+y W+ee++e+L++di + ++ +++Gsi + e++ +++ +iDGQQR+tT++lllka + +
VIMSS27426 16 GTIFSIPVYQRNYTWEEENCEKLLQDIVNisqnKKTHFMGSITYIlhlidD--EKSlrqLQEFVIIDGQQRITTIMLLLKAietkiqnegI--KkeidG 110
3339****************************99**********9*99752..333357**********************7666555542..044455 PP
DUF262 83 kekeeeeklklekreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikekaieklklveielddeddedeafeiFerl 181
+ ++l+l++ ++dk+ f+ +++n++ e + + k+ +++ k+l ++ ++ ++ ++y ++ lk+v i l+ ed+ + +Fe++
VIMSS27426 111 LLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIKNNYKFFTKEL--DNYISKGYRIEEIYGAFLW-----LKIVAIGLE--LGEDDPQVVFESI 200
666788999********************99988555555555555555..3345555556666666655.....899999999..66679******** PP
DUF262 182 NsrGvpLsaadllkalll 199
N++Gv+L+ dl++++l+
VIMSS27426 201 NATGVQLKGLDLIRNYLM 218
***************985 PP
== domain 2 score: -1.4 bits; conditional E-value: 0.12
DUF262 108 e 108
+
VIMSS27426 559 K 559
1 PP
Or compare VIMSS27426 to CDD or PaperBLAST