VIMSS275364 has 270 amino acids
Query: DUF1980 [M=108]
Accession: PF09323.14
Description: DUF1980 N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.9e-38 116.8 7.0 4.7e-38 116.1 7.0 1.4 1 VIMSS275364
Domain annotation for each sequence (and alignments):
>> VIMSS275364
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 116.1 7.0 4.7e-38 4.7e-38 1 108 [] 2 102 .. 2 102 .. 0.97
Alignments for each domain:
== domain 1 score: 116.1 bits; conditional E-value: 4.7e-38
DUF1980 1 lrfliLlgfalllfkLvlsgklskYInpkyayllylamvvllilalvqlvlwikeeekekcdcghdheeesklkkllvylllllPlllglllptatLd 98
+rfliL+g+++l ++L lsgkl++YIn +y+yl+y++mv+++ila+vql++w+k+++ +++h ++k++k ++ ++l++P+l+gll+pt++Ld
VIMSS275364 2 IRFLILAGYFELSMYLKLSGKLNQYINTHYTYLAYISMVLSFILAIVQLIIWVKNMK----MHSH---LHGKIAKSTSPMILVFPVLVGLLVPTVSLD 92
8*******************************************************9....5556...77**************************** PP
DUF1980 99 ssivkakgvh 108
s++v+akg++
VIMSS275364 93 STTVSAKGYN 102
********96 PP
Or compare VIMSS275364 to CDD or PaperBLAST