VIMSS281985 has 620 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-229 747.2 1.6 6.2e-229 746.9 1.6 1.0 1 VIMSS281985
Domain annotation for each sequence (and alignments):
>> VIMSS281985
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 746.9 1.6 6.2e-229 6.2e-229 2 542 .. 18 609 .. 17 610 .. 0.97
Alignments for each domain:
== domain 1 score: 746.9 bits; conditional E-value: 6.2e-229
TIGR00110 2 arallkatGlkdedle.kPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
aral++a+G++ +d++ kPiia++ns+ e+ Pghvhl++++++v+e+i++aGg++ efnt+av+DGiamgh+Gm+ysLpsr+iiaD+ve+ ++ah++D
VIMSS281985 18 ARALYRAAGVSGDDMGkKPIIAIANSFDEFLPGHVHLNKVGRIVSEAIREAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQCNAHCAD 115
79*************637******************************************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklse.kidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
al++i++CDk+vPGmlmaalrlniP+++vsGGpmeag t l++ ++ +d+++ + ++a++++s+eel ++e++ cPt+gsC+G+ftansm+cltea+
VIMSS281985 116 ALICIPNCDKVVPGMLMAALRLNIPTVFVSGGPMEAGTTVLADgTVKSTDLIDVMYATADDNVSDEELLNYEKTVCPTCGSCAGMFTANSMNCLTEAI 213
**************************************99976368999************************************************* PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvP 286
Gl+lPg++t+la ++ +k+l+k+++k++v++ ++++ Pr+i+tkeafena+t+d+a+GGstntvLh+la+a++a+v+++ldd++r+s++vP
VIMSS281985 214 GLALPGNGTILASHSYRKDLFKRAAKQVVKIAHQYYDdsddsvlPRSIATKEAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTLDDIERISHTVP 311
************************************99************************************************************ PP
TIGR00110 287 llaklkPsgkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr................................vdqd.... 348
+++k +Psgk i d+hraGG++++l+eld++g+lh++++++ tl+ +l++ +++r +d+d
VIMSS281985 312 CICKASPSGKWEISDVHRAGGITGILGELDRAGKLHTNVHSIDYPTLEAKLADWDIMRptcteeaqqmykaapghiispepwthttlfdsLDRDrtng 409
******************************************************************************************44444456 PP
TIGR00110 349 virsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLg 446
i+ +++p +egglavL+Gnla++G+vvk+agv +i+kf+Gpa v +s+e+a+e il+ +k G +viryeGPkGgPGm+emL+Pts+++g G+g
VIMSS281985 410 AIHDINHPEIHEGGLAVLRGNLAPDGCVVKTAGVPPEIWKFRGPALVVDSQEQAIEVILNDTLKPGMALVIRYEGPKGGPGMQEMLYPTSFVKGKGIG 507
************************************************************************************************** PP
TIGR00110 447 kkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea......revkgaLakyaklvssadkG 538
k+va++tDGr+sGg++Gl+iGh++Peaa+ G++al+++GD+i iDie+r +++e+ +e l+err++ ++ + r+v+ aL++ya +++sadkG
VIMSS281985 508 KQVAMLTDGRYSGGSSGLAIGHMAPEAANKGPVALIKNGDIIDIDIEARSVNVELTDEQLDERRRELEAGDGyvahrnRHVSQALKAYAAFARSADKG 605
****************************************************************99887665677777******************** PP
TIGR00110 539 avld 542
a +d
VIMSS281985 606 ATRD 609
*876 PP
Or compare VIMSS281985 to CDD or PaperBLAST