VIMSS282193 has 1261 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.3e-131 422.4 0.0 6.6e-131 421.7 0.0 1.3 1 VIMSS282193
Domain annotation for each sequence (and alignments):
>> VIMSS282193
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 421.7 0.0 6.6e-131 6.6e-131 1 272 [. 963 1234 .. 963 1235 .. 0.99
Alignments for each domain:
== domain 1 score: 421.7 bits; conditional E-value: 6.6e-131
Met_synt_B12 1 dleelveyidWtpffqaWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnsegddievyadesrseelatlhtLrq 95
dl+e+++yidWtpffq+Wel+g+yp+iledek+ge+a++l++dAqamL+kii+ek+++ +avvg++pAn++gddi +++desr+eelatl tLrq
VIMSS282193 963 DLAEIARYIDWTPFFQTWELRGRYPAILEDEKQGEAARQLWADAQAMLRKIIDEKWFTPRAVVGFWPANAVGDDIRLFTDESRKEELATLFTLRQ 1057
699******************************************************************************************** PP
Met_synt_B12 96 qaekeegkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkelWgyakdeklsneel 190
q +k++g+pn+++aDfvap esg++Dy+G+F+vtag+g +++++fe+++ddYsailvkaladr+aeAfael+he+vrke+W ya+de+++ eel
VIMSS282193 1058 QLTKRDGRPNVAMADFVAPVESGKQDYVGGFVVTAGIGEIAITERFERANDDYSAILVKALADRFAEAFAELMHERVRKEFWAYAPDEAFTPEEL 1152
*********************************************************************************************** PP
Met_synt_B12 191 ikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFavgkiekdqvedyakrk 272
i+e Y+giRpApGYpa+pdhtek+tlf+llda++++g+eLtes+am+P +svsGly+ hpe+ yF+v+k+e+dqvedya+rk
VIMSS282193 1153 ISEPYKGIRPAPGYPAQPDHTEKTTLFRLLDATANTGVELTESYAMWPGSSVSGLYIGHPESYYFGVAKVERDQVEDYARRK 1234
*********************************************************************************9 PP
Or compare VIMSS282193 to CDD or PaperBLAST