VIMSS28284 has 282 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.3e-40 124.1 2.0 4.3e-40 124.1 2.0 1.7 2 VIMSS28284
Domain annotation for each sequence (and alignments):
>> VIMSS28284
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 124.1 2.0 4.3e-40 4.3e-40 3 198 .. 14 232 .. 12 233 .. 0.66
2 ? -0.9 0.3 0.084 0.084 112 145 .. 241 274 .. 231 280 .. 0.42
Alignments for each domain:
== domain 1 score: 124.1 bits; conditional E-value: 4.3e-40
DUF262 3 dllskkksg.fliPdyQRgyvWdeeqvedLiedike......lrgyplGsivlw...keaededgkyeviDGQQRltTltlllka.............. 77
d+l + ++iPdyQR+y W+e+++e+L++d+ + ++gy++Gs+vl +++e++ ++y+++DGQQRl+T++ll k+
VIMSS28284 14 DILATALVSyYQIPDYQRPYQWTEKNCEKLLDDLFSsyeyykESGYFCGSLVLIvinTDSETNAETYDIVDGQQRLSTFILLAKVlatlydkdldttsr 112
55555555568*******************************************995555555**********************65543222222222 PP
DUF262 78 ..leedekekeeeeklkle.kreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikek...........ai..eklkl 160
l e++l + +++ + f+ n+k+ + + ++f+d ++++++++++n++k+ + +k++ +i ++k+
VIMSS28284 113 elL---------EKSLGDTgGEKRERLHFNAMGLNAKDDF-------VYALEHFNDSQASKNKNNKNNYLKNAICLKDYlkekeikdinaFItwLYFKV 195
111.........1111111111122222222222222221.......1122233333445556666666666666666666668888876445566788 PP
DUF262 161 veielddeddedeafeiFerlNsrGvpLsaadllkall 198
v+i+++ + + + a +iF +lN+rG+pL a d++k +l
VIMSS28284 196 VFIKTT-CPNVSMALRIFSVLNARGLPLHAIDVFKVEL 232
888777.478889*********************9876 PP
== domain 2 score: -0.9 bits; conditional E-value: 0.084
DUF262 112 eelekleklkelngkkfkdlseeekseseknlik 145
+++e l ++ l++k +++ s+ k++++k+ ++
VIMSS28284 241 DQEEFLSRWSALHQKCSENESKFPKRKENKREKN 274
3333344444444444444433333444433333 PP
Or compare VIMSS28284 to CDD or PaperBLAST