VIMSS30267 has 329 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-31 95.6 0.0 1.5e-30 92.5 0.0 2.0 1 VIMSS30267
Domain annotation for each sequence (and alignments):
>> VIMSS30267
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 92.5 0.0 1.5e-30 1.5e-30 3 182 .. 157 307 .. 155 323 .. 0.90
Alignments for each domain:
== domain 1 score: 92.5 bits; conditional E-value: 1.5e-30
UPF0020 3 yRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagv 101
+R+f p +L +++A+a+v+l+++ ++ lDP+ G+G++lIEa+l+g +++ g+D+ + +v+ga+ N+e++g+
VIMSS30267 157 RRPFSRPIALPPRIARAMVNLTKA--TREVLDPFMGTGGMLIEAGLIGLKVY--------------------------GLDIREDMVEGAKINLEYYGI 227
8********************966..5679********************99..........................********************* PP
UPF0020 102 gdliefsqadaakLr..lkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekaleeralr 182
d + +++ da+k++ + + +++++t+pPYG++++ + ++LY+ l+++++vl+g rl+++++++ + +++e+ ++
VIMSS30267 228 RDYV-VKVGDATKIEevFPGKTFEAVATDPPYGNSTTLPMDRNELYKRSLESIHSVLEG--RLAIAFPADFDARDVAESIGFK 307
**98.5777******7756679************************************9..********99999988876555 PP
Or compare VIMSS30267 to CDD or PaperBLAST