VIMSS306117 has 276 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.13
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-104 334.2 5.2 2.1e-104 334.0 5.2 1.0 1 VIMSS306117
Domain annotation for each sequence (and alignments):
>> VIMSS306117
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 334.0 5.2 2.1e-104 2.1e-104 1 218 [. 54 271 .. 54 272 .. 0.99
Alignments for each domain:
== domain 1 score: 334.0 bits; conditional E-value: 2.1e-104
DUF3053 1 llvllvvllLagCgdkekeqRkAFiefLqntvirsgvklptlteeqkkafGdyasdYavltafsqqlsqavdtslepvldavsrirvpqdyvtqrdel 98
l++ll+v++L+gC+dke +qRkAFi+fLqntv+rsg++lptlt++qkk+fG+++sdYa+l+++sqq++qa+d++l+pv+d+v++irvpqdyvtq+ l
VIMSS306117 54 LAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPL 151
579*********************************************************************************************** PP
DUF3053 99 rqaagalnllaqqlqnakaqadaaraaLkqpddlkvvydkaydktVtapanaltrvipaaeslveqlvqvgdflqkqgdqvefegngiqvktpqqasq 196
r+++g+l++laqqlqnak qadaa++aLkq+ddlk+v+d+a++k+Vt+pa+al+++ipaa+++++qlv+vgd++++qg+qv+f +ngiq++t+qqas+
VIMSS306117 152 REMNGSLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASE 249
************************************************************************************************** PP
DUF3053 197 yNkllteLaeqqqellqaqksl 218
yNkl+++L++q+q+++qa++++
VIMSS306117 250 YNKLIAPLPAQHQAFNQAWTTA 271
*******************976 PP
Or compare VIMSS306117 to CDD or PaperBLAST