VIMSS309621 has 390 amino acids
Query: DUF898 [M=336]
Accession: PF05987.17
Description: Bacterial protein of unknown function (DUF898)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-89 286.6 34.5 3.3e-89 285.3 34.5 1.6 1 VIMSS309621
Domain annotation for each sequence (and alignments):
>> VIMSS309621
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 285.3 34.5 3.3e-89 3.3e-89 3 335 .. 9 381 .. 7 382 .. 0.88
Alignments for each domain:
== domain 1 score: 285.3 bits; conditional E-value: 3.3e-89
DUF898 3 rvaFtGsggeyfriwivNllLtivTLGiYsaWakvrtrrYfygnTrldgspfeYtatplellkGrlialvllvlyslasavspllalllllllllllp 100
++F+G+gge+f+iwivN+lL+++TLGiYsaWakvrt+rYfygnT ++g++feY+a+p++llkGrl+al+l+v++++a+ + pl++l+ll+l++++lp
VIMSS309621 9 SIQFKGQGGEFFGIWIVNILLSVITLGIYSAWAKVRTKRYFYGNTFIAGDNFEYHAQPMQLLKGRLVALALVVIWVVANSFFPLASLVLLALFYVALP 106
689*********************************************************************************************** PP
DUF898 101 wlivrslrFrlrntsyrgirfgfdgslaeaykaflllpllalltlglll.............................PlaearqkrylvnntryGte 169
wl+++ rF ++tsyr+++f+f+gsl eay+++l+ l++ll + +++ ++ a +++y++++++yG+
VIMSS309621 107 WLLWSNARFDSAMTSYRNVHFAFNGSLKEAYMSILGRGLASLLIIAIYIaivvasanasamvatllgfgtlvlmfvlyAWVVAGIHQYFASGYQYGDW 204
***************************************999777777777888888888888888888888888888******************** PP
DUF898 170 rfsfeatagdfykafllalllfllglvlavlllvllaaalleakaleaaaeaka.......lavllllalllllllllalayvkarlfnlvwnatsl. 259
+f ++ ++g f k++ +a+l+ +l +v+++++++ ++ + + ++ e + +a+++l++l++++++l ++ay ++r++n+v++ ++
VIMSS309621 205 KFVAKIETGFFLKTYCKAMLIGFLTAVAFMIVMGTFVLGTDIMNIFAG--EV-DllegkgdFAYVVLTYLVTITMSLGITAYTTTRIRNYVFSRLTAt 299
*********999999999888888887777777665442222221111..11.123455568888888899989*****************9987652 PP
DUF898 260 .....gg.arfssslrarrlvwlllsnllltlltLGlllpwakvrlaryllesltveaegdldevvaaeqqevsalGeelad 335
+ +rf+s++ +++++ l+++n+ll ++tLGl++pw+ vr+ ry++ ++ v ++ d + ++++++ ++a+++e+a+
VIMSS309621 300 aeaqsETeFRFASTFGVWDYMSLIVTNFLLQVITLGLARPWVMVRTSRYVASHTGVIGDMDTLKATDQDSAVKNAISDEVAQ 381
2222244589********************************************************999999*******987 PP
Or compare VIMSS309621 to CDD or PaperBLAST