VIMSS314446 has 562 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-243 793.9 2.3 4.2e-243 793.7 2.3 1.0 1 VIMSS314446
Domain annotation for each sequence (and alignments):
>> VIMSS314446
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 793.7 2.3 4.2e-243 4.2e-243 1 542 [. 14 556 .. 14 557 .. 0.99
Alignments for each domain:
== domain 1 score: 793.7 bits; conditional E-value: 4.2e-243
TIGR00110 1 aarallkatGlkde..dlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkaha 96
+ar+ll+atG ++ d++kP++a++nsy++ivPghvhl++la+++ke+i++aG++++efnti+v+DGiamgh Gm+ysLpsreiiaD+ etv++ah+
VIMSS314446 14 PARSLLHATGALKQptDMNKPFVAICNSYIDIVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADAAETVINAHW 111
579*******865434********************************************************************************** PP
TIGR00110 97 lDalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltea 194
+D++ i++CDki+PGml+aa+r+n+Pai+ sGGpm+ag + ++ ++l+++feavg+ ++g +s e ++e++acPt+gsC+G+ftansm+cl+e+
VIMSS314446 112 FDGVFYIPNCDKITPGMLLAAVRTNVPAIFCSGGPMKAGLSAQGKALTLSSMFEAVGAFKEGTISKEAFLDMEQNACPTCGSCAGMFTANSMNCLMEV 209
************************************************************************************************** PP
TIGR00110 195 lGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklk 292
lGl+lP+++t+la+s +++e++++++ r+ve +k++ikPrdi+t++a+++a++ld+a+GGstntvLh+laia+eag++++l++++++++k+P l+k++
VIMSS314446 210 LGLALPYNGTALAVSDQRREMIRQAAFRLVENIKNDIKPRDIITQDAIDDAFALDMAMGGSTNTVLHTLAIANEAGIDYDLERINEIAKKTPYLSKIA 307
************************************************************************************************** PP
TIGR00110 293 PsgkkviedlhraGGvsavlkeldk.egllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkf 389
Ps+++ ++d+h+aGGv+a+++el k +g+lh d ltvtGktl e+ e +++ + dvi++l+np+ k+ggl vL+Gnla++Gav+k++gv+ +i +f
VIMSS314446 308 PSSSYSMHDVHEAGGVPAIINELMKkDGTLHPDRLTVTGKTLRENNEGKNIK--NFDVIHPLENPYDKQGGLSVLFGNLAPKGAVIKVGGVDPSIKVF 403
**********************987589********************9999..99****************************************** PP
TIGR00110 390 eGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDk 487
+G+a f+s++ea+eai + v+eG+vvviryeGPkGgPGm+emLaPts +vg GLgk+vaLitDGrfsG+trG+++Gh+sPeaa+gG+i+l++dGDk
VIMSS314446 404 TGKAICFNSHDEAVEAIDNHTVREGHVVVIRYEGPKGGPGMPEMLAPTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIGLIRDGDK 501
************************************************************************************************** PP
TIGR00110 488 ikiDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
i+iD+ nr+l+++ seeel +r+++ ++ +a+ + g+La+y++lv+sa++G++++
VIMSS314446 502 ITIDLINRTLNVNQSEEELYRRKNQLEPFRAKVKTGYLARYTSLVTSANTGGIMQ 556
****************************************************986 PP
Or compare VIMSS314446 to CDD or PaperBLAST