VIMSS31960 has 575 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-218 711.4 2.7 4.3e-218 711.2 2.7 1.0 1 VIMSS31960
Domain annotation for each sequence (and alignments):
>> VIMSS31960
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 711.2 2.7 4.3e-218 4.3e-218 2 540 .. 33 573 .. 32 575 .] 0.99
Alignments for each domain:
== domain 1 score: 711.2 bits; conditional E-value: 4.3e-218
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDal 100
ar +l+a+G+ ded+ kP+i+v++s++ei+P++++l+ la++vke++ +aGg + ef+ti+vsDGi+mgheGm++sL+sre+iaDsve v++a++lD+
VIMSS31960 33 ARGMLRAVGMDDEDFAKPQIGVASSWNEITPCNLSLDRLANAVKEGVFSAGGYPLEFGTISVSDGISMGHEGMHFSLVSREVIADSVEVVMQAERLDGS 131
799************************************************************************************************ PP
TIGR00110 101 vvissCDkivPGmlmaalrlniPaivvsGGpmeagktkl....sekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclteal 195
v+++ CDk +PGmlmaa+rl++ a++ + G++ +g+ kl ++++++d+feavg+++ g +s +++++ier cP+ g+C+G++tan+ma+++eal
VIMSS31960 132 VLLAGCDKSLPGMLMAAARLDLAAVFLYAGSILPGRAKLsdgsERDVTIIDAFEAVGACSRGLMSRADVDAIERAICPGEGACGGMYTANTMASAAEAL 230
**************************************96654579***************************************************** PP
TIGR00110 196 GlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
G+slPgs++ +at+ ++ +a++sg+ +vel+++ i+ rdiltkeafenai++++a GGstn+vLhllaia+ea+v lsl+df r+ + vP+la++kP
VIMSS31960 231 GMSLPGSAAPPATDRRRDGFARRSGQAVVELLRRGITARDILTKEAFENAIAVVMAFGGSTNAVLHLLAIAHEANVALSLQDFSRIGSGVPHLADVKPF 329
*************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpa 393
g++v+ d+++ GGv+ v+k l +gllh d+ltvtG+t+ae+l+ ++ d +v+r+l np++ gg+ +L+G+la+eGavvk+ag ++ +feG+a
VIMSS31960 330 GRHVMSDVDHIGGVPVVMKALLDAGLLHGDCLTVTGHTMAENLAAITPPDPDGKVLRALANPIHPSGGITILHGSLAPEGAVVKTAGFDS--DVFEGTA 426
**********************************************99988999************************************..679**** PP
TIGR00110 394 kvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDi 492
+vf+ e +al+a+ +g ++ Gd vviryeGPkGgPGmremLa t a++g+GLgk+v L+tDGrfsGgt+Gl++Gh++Pea+ gG+ial+++GD+i++D+
VIMSS31960 427 RVFDGERAALDALEDGTITVGDAVVIRYEGPKGGPGMREMLAITGAIKGAGLGKDVLLLTDGRFSGGTTGLCVGHIAPEAVDGGPIALLRNGDRIRLDV 525
*************************************************************************************************** PP
TIGR00110 493 enrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGav 540
r ld+ + +e+a+r+++ +++ +r++ g+L+ky klvssa Gav
VIMSS31960 526 AGRVLDVLADPAEFASRQQDFSPPPPRYTTGVLSKYVKLVSSAAVGAV 573
***********************************************9 PP
Or compare VIMSS31960 to CDD or PaperBLAST