VIMSS321303 has 564 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-192 626.0 6.2 3.1e-192 625.8 6.2 1.0 1 VIMSS321303
Domain annotation for each sequence (and alignments):
>> VIMSS321303
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 625.8 6.2 3.1e-192 3.1e-192 1 542 [. 17 554 .. 17 555 .. 0.99
Alignments for each domain:
== domain 1 score: 625.8 bits; conditional E-value: 3.1e-192
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++ra+++a+Gl d+ + kP++++v+ e +P++++ + ++k +ie+aGg++ ef t++vsDGi+m+heGmk+sL sre+iaDs+e+vv++ a+D
VIMSS321303 17 PHRAFMRAMGLDDAAIAKPMVGIVSMKGEQTPCNMTHDFQVAAAKTGIEEAGGTPREFSTVSVSDGISMNHEGMKFSLFSRELIADSIEAVVHGLAYD 114
69*********************************9888888999***************************************************** PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
al+ + CDk +PG++m+++r n+P+i+++GG+ +g++ ++ ++++d +eavg+ g+++ ++le+ier + Pt g+C+G ftan+m +++ea+G
VIMSS321303 115 ALIGYGGCDKTLPGVMMGMVRCNVPSIFIYGGSSLPGRVD-GRTLTVLDSYEAVGSFMTGEIDSATLERIERACLPTIGACAGQFTANTMGMVSEAMG 211
****************************************.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkkni.kPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkP 293
l++P+ s ++ + ae++++ +++g+ i+e++++ Prdi+t++++en +++ a+GGstn+ Lhl+aia+eag+ +++dd+ ++ ++Pl+++l+P
VIMSS321303 212 LTIPNVSMVPGVYAERAQISRRAGRLIMEMLERGGpLPRDIVTRKSLENGAAIVAATGGSTNAALHLPAIANEAGIAFTIDDVGEVFARTPLIGNLRP 309
*******************************997526************************************************************* PP
TIGR00110 294 sgkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeG 391
+gk+ +d+h+ GG v++el + g+++ +++t+tG+tlae+ ++ d +v+ + + p+ +gg+avLkGnl ++Gav+k+ag ++ feG
VIMSS321303 310 GGKYTAKDVHDIGGAAVVIQELIRTGHIDGNCITITGRTLAEEYGAANAP--DGEVVYAASAPIMPDGGVAVLKGNLCPDGAVIKVAGLKS--QFFEG 403
********************************************999999..9*************************************9..88*** PP
TIGR00110 392 pakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkik 489
a+vfe+ee++++a+ ++ k+G+v+vir eGP GgPGmremL t+ + g G+g+kvaLitDGrfsG+trG++iG+vsPea +gG++alv+dGDki+
VIMSS321303 404 VARVFEDEEACVAAVRDRSYKAGEVLVIRNEGPVGGPGMREMLGVTALIYGQGMGEKVALITDGRFSGATRGMCIGYVSPEAFVGGPLALVRDGDKIR 501
************************************************************************************************** PP
TIGR00110 490 iDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
iD++nr++d+ v+e ela+rr+++k++ +r+ gaLakya+lv +a Gav++
VIMSS321303 502 IDATNRRMDMLVDEPELAARRRDWKPRPPRHRAGALAKYARLVGQAPGGAVTH 554
**************************************************985 PP
Or compare VIMSS321303 to CDD or PaperBLAST