VIMSS3239994 has 207 amino acids
Query: Cas_Cas4 [M=160]
Accession: PF01930.23
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-10 27.3 13.4 2.4e-10 26.9 13.4 1.1 1 VIMSS3239994
Domain annotation for each sequence (and alignments):
>> VIMSS3239994
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.9 13.4 2.4e-10 2.4e-10 10 159 .. 30 203 .. 26 204 .. 0.70
Alignments for each domain:
== domain 1 score: 26.9 bits; conditional E-value: 2.4e-10
Cas_Cas4 10 vCkrklwlfsr.gitmeeeselvelGklihe..esykrek....kevele........kikiDvvkkekeklvvvevKkskki....eeaaklQlly 87
+C rk +l + +++ ++ ++lG++ he e+y +ek +eve++ +++iD+v + e+K + +e + +Q++
VIMSS3239994 30 ICYRKSYLARNiEFERGINEIYLDLGEQYHEriEQYFKEKlncqTEVEIKdeiegmkiSGRIDIVC----GNDLLEIKTISYNyfqvKEYHLYQVAL 122
8*****9987666666677888899******885666666778899999447889999999*****....444455555443223339999****** PP
Cas_Cas4 88 YlllLekkgieak.Gvleypeekkree..veldeed.reeleevikeiee...iissekppea..ekkkiCkkCayaelCv 159
Y +L+k++ +++ ++ y++ + re ++de+ ++ ++vi+ i++ ++++++ ++ +++ iCk+C++++ C+
VIMSS3239994 123 YYHILKKQNYQINnVYIIYLNRNTREVkqFKIDEKVlETYYQKVIEWIKKfkeYLKETDYKKVpgVNNYICKSCEFKQKCI 203
*************89999988766654337777764134455555555550005555544433125677***********7 PP
Or compare VIMSS3239994 to CDD or PaperBLAST