PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS330247 to PF14393 (DUF4422)

VIMSS330247 has 258 amino acids

Query:       DUF4422  [M=220]
Accession:   PF14393.10
Description: Domain of unknown function (DUF4422)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.2e-92  294.9   1.0    2.7e-92  294.6   1.0    1.1  1  VIMSS330247  


Domain annotation for each sequence (and alignments):
>> VIMSS330247  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  294.6   1.0   2.7e-92   2.7e-92       1     220 []       4     220 ..       4     220 .. 0.99

  Alignments for each domain:
  == domain 1  score: 294.6 bits;  conditional E-value: 2.7e-92
      DUF4422   1 kilvathkkyelpedelylpiqvGaalkkkedlgylkDdtGdnISekNpsYcELTalYwawknlkdadyvGlvHYRRyfskkkkkekklkkilseeei 98 
                  +i+va+hk+y++p+d++y pi+vGaa++  + ++y+ D+ GdnIS+ Np+++ELTa+Y +wkn+ +ad+ Gl  YRRy+s+  k  +kl+ ils +ei
  VIMSS330247   4 QIYVAAHKPYQMPQDPTYRPIFVGAAIHGGAPQNYQPDNVGDNISASNPNFNELTAMYRIWKNC-HADVKGLNQYRRYLSEAPK--RKLAGILSMTEI 98 
                  69*************************************************************9.****************999..8*********** PP

      DUF4422  99 eellkkydiilpkkrklkieslyeqyaeahkkedldllrevikekypeyleafdkvmkkksahlfNmfimkkelfdeYcewLFdilfelekridisky 196
                  e+ll++yd+i+pkkr+++ies+y++y++ah++e+ld++r+vi+e++  yl++fd++m+++sah+fNm+im    fd+Y++w+Fdilf++++ridi +y
  VIMSS330247  99 ESLLQQYDVIVPKKRHYYIESNYSHYVHAHHREPLDMMRTVISERHAAYLDDFDQLMHQTSAHMFNMMIMAGPKFDDYAKWVFDILFAVRDRIDIADY 196
                  ************************************************************************************************** PP

      DUF4422 197 dayqkRvfGflsErLlnvwleknk 220
                  d +++RvfG+lsE+Ll+vw+++n+
  VIMSS330247 197 DVQEARVFGYLSEFLLDVWINHNQ 220
                  *********************985 PP



Or compare VIMSS330247 to CDD or PaperBLAST