VIMSS330623 has 241 amino acids
Query: DUF554 [M=220]
Accession: PF04474.17
Description: Protein of unknown function (DUF554)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.1e-62 194.8 24.4 8.2e-62 194.6 24.4 1.0 1 VIMSS330623
Domain annotation for each sequence (and alignments):
>> VIMSS330623
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 194.6 24.4 8.2e-62 8.2e-62 1 220 [] 3 231 .. 3 231 .. 0.97
Alignments for each domain:
== domain 1 score: 194.6 bits; conditional E-value: 8.2e-62
DUF554 1 lGtivnalailvGsllGlllkkrlperlketlmqalGlvvlliGismalksknlllvilslvlGgliGelldlekrlerlgeklkkklkkkk...... 92
+G+i n++ai++G+++G+l +kr+++rlk+ l + +G++++++Gi ++ knl +vi+++++G+ iG l++l +++++ ++ +++ +++
VIMSS330623 3 IGIITNVCAIFFGGIVGALTGKRMSQRLKDGLNMSFGICSMCMGIYAIAPLKNLAAVIFAVIIGTGIGLLCHLGTAINHGAAAMQRFISRFVkapatf 100
79********************************************************************************9999887555678999 PP
DUF554 93 ...efaegfvtasllfcvGamailGsleeGltgdatiLltksiLDgvtaiilastlGigvlfsalpvlvyqglltllAsllspllteeviaelsavGg 187
+f + +vt+++lfc+++++i+G+l+eG++gdatiL++ksiLD+++a+i++++lG++v ++a+p+l++ ++l+l+A+l+ pl+t+++i +++avGg
VIMSS330623 101 ekqAFEQTMVTVIVLFCASGTGIYGTLTEGMNGDATILISKSILDFFAAVIFGANLGLVVSLIAVPQLIILTALFLIAHLVFPLTTPDMILDFKAVGG 198
9989********************************************************************************************** PP
DUF554 188 llilaiGlnlleikkikvanllPalllavllva 220
+l++a+G++++ +k +++a+++P +++++++++
VIMSS330623 199 ILMVASGFRIIAVKMFPTADMIPMMVVIMPISW 231
*****************************9986 PP
Or compare VIMSS330623 to CDD or PaperBLAST