VIMSS331607 has 1106 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.4e-12 30.9 1.8 7.4e-12 30.9 1.8 3.4 3 VIMSS331607
Domain annotation for each sequence (and alignments):
>> VIMSS331607
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 30.9 1.8 7.4e-12 7.4e-12 5 168 .. 23 172 .. 19 190 .. 0.72
2 ? -5.4 4.9 0.77 0.77 108 158 .. 549 600 .. 492 636 .. 0.69
3 ? 0.5 6.9 0.013 0.013 281 361 .. 979 1058 .. 841 1076 .. 0.67
Alignments for each domain:
== domain 1 score: 30.9 bits; conditional E-value: 7.4e-12
DUF3533 5 lavlilailsiyw.GalykrsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvke 99
+++li + si++ ++++ +++nl+v+vVneD+ +++ + +vg++v + l++++ +w+++ + ++ ++ + + ky+ +++++
VIMSS331607 23 VMILIPFLYSIFFlKSVWDPYGDTQNLPVAVVNEDKSvnYQGEKFAVGKQVVTNLKKNN---DLDWHFV-------SAKKAKQGLKDRKYYTVVTIPS 110
455555555555427999999****************9977777777777766666655...489*999.......6999****************** PP
DUF3533 100 natealyaalasangassynstdllelvyesgrdptnvksyilpi.lqaleaaalakyssellqsliksl 168
n++++ ++ + ++ + ++l ye++ + + ++++i+++ ++ +++ ++a++++ + + k++
VIMSS331607 111 NFSKNATTMTDTNPK--------KMNLHYETNESLNYIAKVITDTgVSRVNKSIRAQVTKAYALAIFKQI 172
*****9999943333........35666666666666666665432566666666666666555555554 PP
== domain 2 score: -5.4 bits; conditional E-value: 0.77
DUF3533 108 alasangassynst.dllelvyesgrdptnvksyilpilqaleaaalakyss 158
++a+++ a+ n++ ++++ + + ++t+v+ ++++++++l++ ++ ++ s
VIMSS331607 549 STAKQQAATDLNAKmKQVQTTLGTVSKATTVDASLAQSFEKLQSGVNTYIDS 600
4444444444555556677777777777777777777777777777664333 PP
== domain 3 score: 0.5 bits; conditional E-value: 0.013
DUF3533 281 yWmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsptfvPlelspgFYryGyal.PlhniveilkvIffdtsk 361
y ++ +++la+ +++ + +++ + +++++++l+ l s +++P+e+ ++F+ + Pl +++++ ++ +++++
VIMSS331607 979 YYLTAIMIALASMFLVMFLSMLF-DNPGRFVAMVILM-LQLGGSGGTFPMEITNKFFNAIHPYlPLTYSIQAFRQALTGGWG 1058
55555555555555555445555.6667777777665.56888999************999877***********9999886 PP
Or compare VIMSS331607 to CDD or PaperBLAST