VIMSS333385 has 185 amino acids
Query: CM_2 [M=79] Accession: PF01817.25 Description: Chorismate mutase type II Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5e-18 51.6 0.4 1e-17 50.6 0.2 1.6 2 VIMSS333385 Domain annotation for each sequence (and alignments): >> VIMSS333385 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 50.6 0.2 1e-17 1e-17 11 78 .. 33 100 .. 31 101 .. 0.97 2 ? -2.8 0.0 0.49 0.49 1 15 [. 126 140 .. 126 142 .. 0.75 Alignments for each domain: == domain 1 score: 50.6 bits; conditional E-value: 1e-17 CM_2 11 lleLlaeRmelakeiaeyKkenglpvldpeReeevlerlregaeelgldpeavekifreiisesralQ 78 ll+ ++eR+ +a+++a K ++g++v dp Re++v++ +++ a+e +l+p+ v+++fr+ i++ +++Q VIMSS333385 33 LLQAISERLTIADQVALSKWDSGKAVEDPPREQQVISAAQARADEFKLNPDDVQRLFRAQIEANKQVQ 100 899**************************************************************999 PP == domain 2 score: -2.8 bits; conditional E-value: 0.49 CM_2 1 RkeIdeiDrelleLl 15 R ++d++ +ll+ VIMSS333385 126 RPKLDRLQTQLLQAY 140 667899999998865 PP
Or compare VIMSS333385 to CDD or PaperBLAST