VIMSS3344143 has 272 amino acids
Query: DUF3298 [M=83]
Accession: PF11738.12
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.1e-13 36.9 0.0 8e-13 35.5 0.0 1.7 2 VIMSS3344143
Domain annotation for each sequence (and alignments):
>> VIMSS3344143
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.1 0.0 0.44 0.44 15 30 .. 88 103 .. 76 129 .. 0.51
2 ! 35.5 0.0 8e-13 8e-13 2 82 .. 160 259 .. 159 260 .. 0.93
Alignments for each domain:
== domain 1 score: -2.1 bits; conditional E-value: 0.44
DUF3298 15 selikkqlkkqaeeqe 30
+++++ +++++++ +
VIMSS3344143 88 RDYLRNLYNNWKAKGA 103
4444444444443222 PP
== domain 2 score: 35.5 bits; conditional E-value: 8e-13
DUF3298 2 DlFkpg..sdyleals.elikkqlkkqaeeqeleeyeeleee..fdaddisaydnFyltddglvfyfnpYeia........Pyaa......Gaieft 79
D++kpg d++++l+ +++ + + ++a+++++ +y+++ e+ +d+ + + y+ ++lt+d+lv+y+++Y +a P+a G++e +
VIMSS3344143 160 DILKPGlgLDAITPLAePYLLEGFDRAAWAHSPGTYPFVPERwtPDKVYSGGYKAWALTPDELVIYMPDYPVAhdypidytPGAQvwsmdgGTVEAH 256
999***99999****999*******************************************************888888886666777799****** PP
DUF3298 80 iPy 82
iP
VIMSS3344143 257 IPI 259
*95 PP
Or compare VIMSS3344143 to CDD or PaperBLAST