VIMSS335753 has 233 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.13
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-86 274.3 0.3 4.3e-86 274.1 0.3 1.0 1 VIMSS335753
Domain annotation for each sequence (and alignments):
>> VIMSS335753
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 274.1 0.3 4.3e-86 4.3e-86 3 218 .. 10 226 .. 8 227 .. 0.97
Alignments for each domain:
== domain 1 score: 274.1 bits; conditional E-value: 4.3e-86
DUF3053 3 vllvv..llLagCgdkekeqRkAFiefLqntvirs.gvklptlteeqkkafGdyasdYavltafsqqlsqavdtslepvldavs..rirvpqdyvtqr 95
+l+v+ llLagCgdke+eqR+AF++fLq+++i++ gv++p+lt+e+kkafGdy+s+Yav+++f +++dt+++p+++ ++ ++r+++d++++r
VIMSS335753 10 LLAVAlpLLLAGCGDKEPEQRTAFSQFLQTRIIDKpGVHVPKLTDEEKKAFGDYTSHYAVISDF----GSGMDTAVQPLAGLMQkgSFRSVSDVIERR 103
344444599*******************************************************....9***************999*********** PP
DUF3053 96 delrqaagalnllaqqlqnakaqadaaraaLkqpddlkvvydkaydktVtapanaltrvipaaeslveqlvqvgdflqkqgdqvefegngiqvktpqq 193
++l++++++l+++ ++l+ ++ +adaa+a+Lkqpddlkvvydkayd+tV++pan++++v+p+++ +++++++v+d+++++++q++++g++i+vk+p++
VIMSS335753 104 ADLASVQKGLDEVGEKLTIEQGKADAAHAKLKQPDDLKVVYDKAYDRTVSVPANTFREVLPQVKGTFASSLKVADYVEAHKSQIDISGSAITVKDPVV 201
************************************************************************************************** PP
DUF3053 194 asqyNkllteLaeqqqellqaqksl 218
++++Nkll eL+eq ++++qaq++l
VIMSS335753 202 QTELNKLLLELNEQGKNAQQAQARL 226
**********************987 PP
Or compare VIMSS335753 to CDD or PaperBLAST