VIMSS3372921 has 287 amino acids
Query: DUF3298 [M=83]
Accession: PF11738.12
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-25 75.0 4.8 4e-25 75.0 4.8 2.4 2 VIMSS3372921
Domain annotation for each sequence (and alignments):
>> VIMSS3372921
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 2.4 1.0 0.017 0.017 16 62 .. 119 161 .. 100 176 .. 0.48
2 ! 75.0 4.8 4e-25 4e-25 2 82 .. 194 269 .. 193 270 .. 0.92
Alignments for each domain:
== domain 1 score: 2.4 bits; conditional E-value: 0.017
DUF3298 16 elikkqlkkqaeeqeleeyeeleee.fdaddisaydnFyltddglvfy 62
e+ k +k+++ q+l++ + ++++ ++ d++ +n td +l +
VIMSS3372921 119 EFYNKSYKEAK--QYLKDNPDEKNKfVANVDFELKKN---TDSALSIK 161
22223332222..233333333333444566666666...55555555 PP
== domain 2 score: 75.0 bits; conditional E-value: 4e-25
DUF3298 2 DlFkpgsdylealselikkqlkkqaeeqeleeyeeleee...fdaddisaydnFyltddglvfyfnpYeiaPyaaGaieftiPy 82
DlFk++++y+e+++e+ik+q+++ ++++e e+ ++++ i++++nFyl d++lv+yf+ Y+i PyaaG++ef+i +
VIMSS3372921 194 DLFKDNTKYKEVIDEEIKRQIAELEKKDE--------ENigiYNFKGIKENQNFYLQDENLVVYFDLYDITPYAAGIPEFSINK 269
9**********************998777........22356899************************************975 PP
Or compare VIMSS3372921 to CDD or PaperBLAST