VIMSS3374480 has 551 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-244 798.1 10.1 2.3e-244 797.9 10.1 1.0 1 VIMSS3374480
Domain annotation for each sequence (and alignments):
>> VIMSS3374480
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 797.9 10.1 2.3e-244 2.3e-244 1 542 [. 13 551 .] 13 551 .] 1.00
Alignments for each domain:
== domain 1 score: 797.9 bits; conditional E-value: 2.3e-244
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahal 97
++ral++ +Gl++e++e+P+i++vn+ +e++Pgh+hl+++a+++k++++ +Gg + ef i+v+DGiamgh Gm+ysL+sre+iaDs+e++++ah +
VIMSS3374480 13 PKRALMYGMGLTKEEIERPLIGIVNAQNEVIPGHLHLDEIAEAAKNGVRMSGGLPLEFPAIGVCDGIAMGHVGMNYSLASRELIADSIEAMAMAHGF 109
589********************************************************************************************** PP
TIGR00110 98 DalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltea 194
Dalv+i++CDkivPGmlmaa+rlniP+ivvsGGpm +gk + ++ +d +++e+vg++++g +seeele++ ++cP++gsCsGlftansm+cltea
VIMSS3374480 110 DALVLIPNCDKIVPGMLMAAARLNIPSIVVSGGPMLPGKKN-GKVYDFNSAMEGVGACKDGTVSEEELEALAMNSCPGCGSCSGLFTANSMNCLTEA 205
***************************************99.9****************************************************** PP
TIGR00110 195 lGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllakl 291
lG+ +P+++t+++ s e+k++ak +g++++el+k++ikPrdilt +af+nai++d+a+ GstntvLhl+aia e g++l+ld fd++s+k+P+l+kl
VIMSS3374480 206 LGMGIPYNGTAASHSGERKRIAKYAGMYVMELLKNDIKPRDILTIDAFKNAIAVDMAMAGSTNTVLHLPAIAYESGIELNLDFFDEISEKTPCLTKL 302
************************************************************************************************* PP
TIGR00110 292 kPsgkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilk 388
+Psgk+ iedlh aGG++a+++el+k + ++ d++tvtGkt+ e++ + ++ +++vi++l+np++++ggla+LkGnla +Gavvk ++v+e++l+
VIMSS3374480 303 SPSGKHHIEDLHMAGGIPAIMNELSKINGINLDCKTVTGKTIRENIRNCEIE--NEEVIHTLKNPYSNQGGLAILKGNLALNGAVVKKSAVAEEMLV 397
**************************************************99..9****************************************** PP
TIGR00110 389 feGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedG 485
+eGpa+vf+seeea++ai+g+k+++Gdv+viryeGPkGgPGm+emL Ptsa++g+GL+k+vaL+tDGrfsG+trG siGh+sPea+egG i+lve+G
VIMSS3374480 398 HEGPARVFNSEEEAVNAIFGKKINKGDVIVIRYEGPKGGPGMKEMLSPTSAVAGMGLDKHVALLTDGRFSGATRGASIGHISPEAMEGGLIGLVEEG 494
************************************************************************************************* PP
TIGR00110 486 DkikiDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
D+i+i+i+++kl+l+v+e e+++r+ k k+ e++ ++g+L++yaklv+sa++Gavl+
VIMSS3374480 495 DIISINIPDKKLELKVDEVEIENRKLKFKPLEPKIKHGYLSRYAKLVTSANTGAVLK 551
*******************************************************85 PP
Or compare VIMSS3374480 to CDD or PaperBLAST