VIMSS3375270 has 370 amino acids
Query: DUF5009 [M=260]
Accession: PF16401.9
Description: Domain of unknown function (DUF5009)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.4e-15 41.0 5.5 8.4e-15 41.0 5.5 2.8 3 VIMSS3375270
Domain annotation for each sequence (and alignments):
>> VIMSS3375270
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 41.0 5.5 8.4e-15 8.4e-15 2 108 .. 5 101 .. 4 172 .. 0.72
2 ? 0.1 0.6 0.025 0.025 147 201 .. 228 278 .. 189 298 .. 0.65
3 ? -3.0 0.4 0.23 0.23 51 133 .. 340 352 .. 330 369 .. 0.48
Alignments for each domain:
== domain 1 score: 41.0 bits; conditional E-value: 8.4e-15
DUF5009 2 aksldalrGiaillmvlsasiafsilpgwmyhaqvpppghkfkpelpGitwvdlvfpfflfamGaaiplalkkkvekgssklkvlldiikrfvlltf 98
ks+d +rG++i lm++ +wm p h G+t d+ fpff+ ++G +ip++++ k ++++s+l ++l+i kr +ll++
VIMSS3375270 5 IKSIDIIRGLSIALMIVCNN-----PGTWMRM--YPQLRHAV---WHGVTLADFAFPFFVISLGVTIPISINSKLKNNKSTLSIILSIFKRSILLIL 91
57888888888888866543.....2347753..45555654...47************************************************** PP
DUF5009 99 falftmhars 108
f f + +
VIMSS3375270 92 FGFFLNYLGN 101
****987655 PP
== domain 2 score: 0.1 bits; conditional E-value: 0.025
DUF5009 147 lvikvvafllaialllllqfkngkkfslyksdiiilvlanmalfgsliylltqkk 201
lv+ ++ ++ a ++ +++f++ l++s ++l+ ++ s+ y++ k
VIMSS3375270 228 LVMSIILLIGAFIFNQYFPFNKR----LWSSSFVLLMAGSYGILLSIFYFICDIK 278
23333333334444444444333....6667777777667777777776665544 PP
== domain 3 score: -3.0 bits; conditional E-value: 0.23
DUF5009 51 twvdlvfpfflfamGaaiplalkkkvekgssklkvlldiikrfvlltffalftmharsyvlssepelkeqllsivcfvllfll 133
tw l+f + l++l
VIMSS3375270 340 TWDSLIFSL----------------------------------------------------------------------LYVL 352
444444432......................................................................2222 PP
Or compare VIMSS3375270 to CDD or PaperBLAST