VIMSS3375270 has 370 amino acids
Query: DUF5009 [M=260]
Accession: PF16401.11
Description: Domain of unknown function (DUF5009)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-12 32.0 5.6 4.4e-12 32.0 5.6 2.8 3 VIMSS3375270
Domain annotation for each sequence (and alignments):
>> VIMSS3375270
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 32.0 5.6 4.4e-12 4.4e-12 3 103 .. 6 96 .. 4 158 .. 0.82
2 ? -1.7 1.1 0.082 0.082 149 193 .. 230 270 .. 197 308 .. 0.58
3 ? -2.4 0.6 0.13 0.13 49 65 .. 337 353 .. 322 368 .. 0.51
Alignments for each domain:
== domain 1 score: 32.0 bits; conditional E-value: 4.4e-12
DUF5009 3 ssldalrgiaillmvlsgsiafgsilpgwmyhaqvpppahkfkpelpgitwvdlvfpfflfamgaaiplalkkkie.vssllkillsivkryvllaf 98
+s+d +rg++i lm++ wm p h g+t d+ fpff++++g +ip+++ k + ++s+l i+lsi kr +ll +
VIMSS3375270 6 KSIDIIRGLSIALMIVCNNPGT------WMRM--YPQLRHAV---WHGVTLADFAFPFFVISLGVTIPISINSKLKnNKSTLSIILSIFKRSILLIL 91
6777788888888777654333......6642..34444443...469***********************98875167899*************** PP
DUF5009 99 falft 103
f f
VIMSS3375270 92 FGFFL 96
*9986 PP
== domain 2 score: -1.7 bits; conditional E-value: 0.082
DUF5009 149 vkvvgillalavlalygfkndkkfslfqndiiilvlanmalfasl 193
+ ++ ++ a+ + +++f++ l + ++l+ ++ s+
VIMSS3375270 230 MSIILLIGAFIFNQYFPFNKR----LWSSSFVLLMAGSYGILLSI 270
333333333333344444433....33333333333333333333 PP
== domain 3 score: -2.4 bits; conditional E-value: 0.13
DUF5009 49 pgitwvdlvfpfflfam 65
g tw l+f ++ +
VIMSS3375270 337 AGTTWDSLIFSLLYVLF 353
45555555555432222 PP
Or compare VIMSS3375270 to CDD or PaperBLAST